Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16002g00001 ATGGTTACAATGGACCCCCTTGTGTCATCAAGATGTTGGCCCTTGAAAAAGGCTGAGCATATAGTGTTTGCAAAGATGAGTGTTATGTATAGTCCTGTTTTCAAGTACTCAGATGTGGAGCTTCAGCTAAGGAAAAACCAAGAAATGGATTCAAGTATTGGACATCCACAGCAACACTGTCACCAGCCCAATTCTGGACTATTGAGGTACTGTTCTGCTCCAAGCTCATTGCTGGCAAGCCTTATTGACAACACCATTCATGGCTGTGTCAATGAGGAATCATTCACAAGTGAGGATCACCAGCATTATGTTCCATCCACAAGTTCAGAAATGGAGACCATGTTGTCCAACAATGGATGGAGCAATTCAGAACCTCTGCAGGAATTTGGAGGGAAGCCTGTGAAGCAGGAAATAGGGGAATCTGTTCCACAAGGACCACCACAACAGAGTGGTTATTCTTATGCTGAATCTCAGTTAGCTTACCAATCTCAGCAAATTCAAGGTTTGTCAAGTGGTTCTTCCAGTGCTGCTGCCAATGCTTTTGATGGCTCTTTTGCAGTGATGAACTCCATTCAATCTAAAATGGGTGTCAGGAATTGCTCCAATCTCTTTAGGCAAAAGAGCTCTCCTGCTGGATTTTTCTCCATTGAAAATGATCTTGCAGCATTGAGAGAAGTAGGAAGCTTTAAAGCGAATGATGTCTCAAATGGACAGGCAACTGCATCAACTAGTGGGTTGCATGGTACTCTTACTTTCTCATCAAGGCCATCCTCATGCTTGAAACGGATGCCACAAATAGCTGAAAATGGAAATGAAAGCCTAGAAGAAAATTGTGACCAAAGTAGGAACCTGGTAAATGACAATGGTAGCTCAAAATGTTACATACCTAGCTTCACCAGTGAATTCTGGGACAGTTCTGCATTCAATGCCCCCAAAACAGAATGTGAAGATGAAATCATGTTTTCCACTTCAAATGCTTTGGAATCTCAGGAAGCAGATTTCAGCCATCAAAATCTTGGTTTGACTCATCACTTGAGCCTACCTAGTTCTTCTACTAAGATGGCATCCATAGAGAAGTTTCTTCAAATTCAAGGTTCTGTTCCTTGTAAAATTCGAGCCAAAAGAGGCTTTGCCACTCACCCGAGAAGCATTGCAGAGAGGGTGAGAAGAACAAGGATTAGTGAAAGAATCAAGAAATTGGAAGGCCTTTTCCCAAAATCAGAAAAGCAAACAAGCACAGCAGATATGTTAGATTTGGCAGTTGAGTACATTAAGGACCTGCAGCAACAAGTTAAGATACTCACAGATTGTAAGGCAAAGTGCAAATGTACAAGTAATGAGAAGCATCACACTAGAACTTGTGCCTGA 1368 0.4196 MVTMDPLVSSRCWPLKKAEHIVFAKMSVMYSPVFKYSDVELQLRKNQEMDSSIGHPQQHCHQPNSGLLRYCSAPSSLLASLIDNTIHGCVNEESFTSEDHQHYVPSTSSEMETMLSNNGWSNSEPLQEFGGKPVKQEIGESVPQGPPQQSGYSYAESQLAYQSQQIQGLSSGSSSAAANAFDGSFAVMNSIQSKMGVRNCSNLFRQKSSPAGFFSIENDLAALREVGSFKANDVSNGQATASTSGLHGTLTFSSRPSSCLKRMPQIAENGNESLEENCDQSRNLVNDNGSSKCYIPSFTSEFWDSSAFNAPKTECEDEIMFSTSNALESQEADFSHQNLGLTHHLSLPSSSTKMASIEKFLQIQGSVPCKIRAKRGFATHPRSIAERVRRTRISERIKKLEGLFPKSEKQTSTADMLDLAVEYIKDLQQQVKILTDCKAKCKCTSNEKHHTRTCA 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16002g00001 455 FunFam Transcription factor bHLH130 family 378 447 - -
Mupr16002g00001 455 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 377 427 IPR011598 GO:0046983
Mupr16002g00001 455 Pfam Helix-loop-helix DNA-binding domain 383 428 IPR011598 GO:0046983
Mupr16002g00001 455 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 73 444 - -
Mupr16002g00001 455 SMART finulus 383 433 IPR011598 GO:0046983
Mupr16002g00001 455 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 380 443 IPR036638 GO:0046983
Mupr16002g00001 455 Gene3D - 379 452 IPR036638 GO:0046983
Mupr16002g00001 455 CDD bHLH_AtbHLH_like 382 434 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16002g00001 Mupr-Chr16002 2365 6765 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16002g00001 59 433 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 33.750 3.97e-47 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr16002g00001 HLH 4.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16002g00001 - - gmx:100812802 726.472