Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15991g00005 TGTTTTCTACTTGCATGGTGCTACTGCTTCAGTGTTTTCTACTTGCATGGTGCTACTGCTTCAGTGTTTTACACGCTGGTAAGAACATTTTCATCCGAAGATTGCCCTTCAAAAGTTGGAGAGAAATATCAAGATCATCTTCAAGCGAAGGGGTTGTCAATATGGCCTTCAACTACTAATGAATACGACGATGATTTACCTCCTGGTTTTGAAAGCAATCATTTCTGGAATCAATCAAAGGCTGAACTCCCTCACATTCCTCAGATTAAATGGGAATGTCCTCCTTTGTTTACTTTGAGTGATGGTTGGCGCGTTGCAGTCGGCGAAGAAAGTAGGGAGATATACGATCAGCAAAAAAGAGAAATAAGAGTGCTTGAAGCAATTTATCCTCGTGCTTATTCCATTCCTCCTGGACCTTCCATTTCTTCTGAGGTGGAGAAGGAATGTTATGATGATAGCCTCACTCCTCTAGTCTCTTTCATTCCTATTGAAGATCAAGAAGGATCAGTGGAATATATTGAACCTCATGTTAAAGCTGCAGTCACAAAACATGAAGACTCTCCCACCAACTTGCAGCAATATATCACATCAGAAACATCTCTCATTAATTCACAATGCAGTGAAAAGAAAAAGCCTGTGGCTATCACATATTCAGAGGCGGAGGTAGCTGCAGCTTCTGCTCTTGTTGTAGCTTCCATGACGAGCAACGAGATTGATATGGACTTGCTAGCTGAAATATTTAATGACCCAGTGATGATTGAGAAATTAATTGAGAAACATAGAACTGTTATCACAACTGTGAGTACACCGACTTCTAATTCTAAACCTAGCACTTCATTGGTTCAATTGTCTTCACCTGCACTCAACACTACAGTTGGTTTATTGCATGCTTCTGAGTCAAGTCAAGAAACACCATCTGTTTCATTGCTGACATCTACACTTGTTAAGCCTGCAACTGCAGTTGCAACTTCATCTGCTAAACCAACAAAAACTCGCCCAGTTACAAGGCATCCACCTTCCACTGGTGCCGTGAAAGATGTCGACAGAAAAGTTATTAGAAAAAGTGATACTCATAAAGAAGACGTGCAGAGGCAAGAGGCGAGAGATGTTAGAAGAAGTGGTACACATAAGGAAGACACACAGAGACAAGGGTTGAAACGGCCACGTGACAACATCACGATGGAGGAAGTGAAATTCAAAATTCAGAAACCATGCAAATACTTTAACAGTTCAAGGGGTTGTCGCAATGGTTCTAATTGCCGTTTTCAGCATGATGTATCAGGAATGAGTCGTATTGCTAAAAGACTGAATGTAAGATCAGAAAATACATGGAGGATGTAA 1341 0.4087 CFLLAWCYCFSVFYLHGATASVFYTLVRTFSSEDCPSKVGEKYQDHLQAKGLSIWPSTTNEYDDDLPPGFESNHFWNQSKAELPHIPQIKWECPPLFTLSDGWRVAVGEESREIYDQQKREIRVLEAIYPRAYSIPPGPSISSEVEKECYDDSLTPLVSFIPIEDQEGSVEYIEPHVKAAVTKHEDSPTNLQQYITSETSLINSQCSEKKKPVAITYSEAEVAAASALVVASMTSNEIDMDLLAEIFNDPVMIEKLIEKHRTVITTVSTPTSNSKPSTSLVQLSSPALNTTVGLLHASESSQETPSVSLLTSTLVKPATAVATSSAKPTKTRPVTRHPPSTGAVKDVDRKVIRKSDTHKEDVQRQEARDVRRSGTHKEDTQRQGLKRPRDNITMEEVKFKIQKPCKYFNSSRGCRNGSNCRFQHDVSGMSRIAKRLNVRSENTWRM 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15991g00005 446 MobiDBLite consensus disorder prediction 320 390 - -
Mupr15991g00005 446 SUPERFAMILY CCCH zinc finger 404 425 IPR036855 GO:0046872
Mupr15991g00005 446 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 363 437 - -
Mupr15991g00005 446 MobiDBLite consensus disorder prediction 342 390 - -
Mupr15991g00005 446 ProSiteProfiles Zinc finger C3H1-type profile. 399 427 IPR000571 GO:0046872
Mupr15991g00005 446 MobiDBLite consensus disorder prediction 320 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15991g00005 Mupr-Chr15991 33791 35485 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr15991g00005 zf-CCCH 7e-05 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15991g00005 - - gmx:102661234 276.174