LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr15991g00001	ATGGCTGCCGCCGGAGAAGTTAACGCTCCTGCTGTAGAAAAGCCAGTAGAGGAGGTGAAGGCCGCGGAGGCGCCGAAGCCTGCGAAGGAGAAAAAACCTAAGACTCCGAAAGAAAAGAAGCCAAGGCAGGCCAAAACTGCTTCACATCCTCCATATTTTCAGATGATCAAGGAGGCTTTGATCGCTCTGAACGAGAAGGGAGGATCGAGCCCTTACGCGATAGTCAAGTACATGGAGGAGAAGCACAAGGCGGTGCTTCCTGCGAATTTCAAGAAGATTCTAGGCCTGCAACTGAAGAACCAAGCTGCCAGAGGGAAACTCGTGAAGATCAAGGCTTCGTACAAGTTATCTGAAACCGCGAAGAAGGAGAAGAAAGAGACTACGACCAAGGTGACGAAGGCCAACGCAGAGAAGAAGGAACCGCGCCCGAAACGAAGCAAAACTGTAACCGCCGCTTCTCCAAAGAGCAAGAAAACCGAGGCGGTTAAAAAGGTCGCGAAGAAGGTTGGGCCGAAGAAGACGAAGAAAGTGTCTACGCCCGCAAAGCCCAAGCAGCCCAAGTCCATCAGGTCTCCGTCCAAGAGGGCCCGTAAAACTGCCGTTGCTGTGGCGGAAACTCTGTTGCATAATATATGTAGATATGTAAAGAAAGGAAGCAGAAATTAA	666	0.5075	MAAAGEVNAPAVEKPVEEVKAAEAPKPAKEKKPKTPKEKKPRQAKTASHPPYFQMIKEALIALNEKGGSSPYAIVKYMEEKHKAVLPANFKKILGLQLKNQAARGKLVKIKASYKLSETAKKEKKETTTKVTKANAEKKEPRPKRSKTVTAASPKSKKTEAVKKVAKKVGPKKTKKVSTPAKPKQPKSIRSPSKRARKTAVAVAETLLHNICRYVKKGSRN	221

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr15991g00001	221	Coils	Coil	117	137	-	-
	Mupr15991g00001	221	SMART	h15plus2	46	113	IPR005818	GO:0000786\|GO:0003677\|GO:0006334
	Mupr15991g00001	221	MobiDBLite	consensus disorder prediction	16	34	-	-
	Mupr15991g00001	221	Pfam	linker histone H1 and H5 family	49	115	IPR005818	GO:0000786\|GO:0003677\|GO:0006334
	Mupr15991g00001	221	SUPERFAMILY	"Winged helix" DNA-binding domain	45	128	IPR036390	-
	Mupr15991g00001	221	PANTHER	HISTONE H1	21	187	-	-
	Mupr15991g00001	221	MobiDBLite	consensus disorder prediction	1	51	-	-
	Mupr15991g00001	221	Gene3D	-	44	130	IPR036388	-
	Mupr15991g00001	221	CDD	H15	46	117	IPR005818	GO:0000786\|GO:0003677\|GO:0006334
	Mupr15991g00001	221	MobiDBLite	consensus disorder prediction	113	201	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr15991g00001	Mupr-Chr15991	1378	2490	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr15991g00001	36	135	Single Myb Histone (SMH) Gene Family	AT1G72740	36.190	3.99e-09	53.5

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr15991g00001	K11275		-	gmx:100500169	253.062

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