Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1598g00011 ATGGAAGAAGGGTGGAAGGGGAAGCGATCGGAGCCACGTCCATGCACTGAGTGCGGAAAGAAGTTCTGGTCCTGGAAGGCTCTTTTCGGTCACATGCGTTGCCACCCCGAGCGTCTTTGGAGAGGGATCAATCCTCCCCCCAATCTCAGAAAACAACAACATCAACAACAATTTACTCAAGAAGATCACGAGGTCGCTGCCTGTCTCTTACTTCTCGCCAATAGCGACAACAATTCCAAGGACAAAGAAGATGAAGATTACCATCACCATCATCATCATCATCATGATCATCATGATGAATGGCTCATGTTTGAGTGCTCCAGTTGCAACAAGGTGTTCGGATCACACCAGGCTCTTGGAGGTCACCGTGCCAGTCACAAGAACGTTAAGGGTTGTTTCGCAAACGCCATACCAACAACAACAACAACATCATCATCAAGTAACTGTGATGGGCACAAGTGCAGTATATGCCTCAGAGTGTTTTCCACTGGACAGGCACTCGGCGGCCACAAGAGGTGTCATTGGGACAAAGGGGACAACCACCCTCCTGTCGACTTGAATTTCCCGCCCCCTTCTCCCTCTCCTCCCCTCACTCTTGATTTGAGTAGAATAGATGATTTTTTTTACTAA 630 0.4857 MEEGWKGKRSEPRPCTECGKKFWSWKALFGHMRCHPERLWRGINPPPNLRKQQHQQQFTQEDHEVAACLLLLANSDNNSKDKEDEDYHHHHHHHHDHHDEWLMFECSSCNKVFGSHQALGGHRASHKNVKGCFANAIPTTTTTSSSSNCDGHKCSICLRVFSTGQALGGHKRCHWDKGDNHPPVDLNFPPPSPSPPLTLDLSRIDDFFY 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1598g00011 209 ProSiteProfiles Zinc finger C2H2 type domain profile. 152 174 IPR013087 -
Mupr1598g00011 209 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 9 191 - -
Mupr1598g00011 209 Pfam C2H2-type zinc finger 104 127 - -
Mupr1598g00011 209 Pfam C2H2-type zinc finger 14 37 - -
Mupr1598g00011 209 Pfam C2H2-type zinc finger 152 177 - -
Mupr1598g00011 209 ProSiteProfiles Zinc finger C2H2 type domain profile. 104 131 IPR013087 -
Mupr1598g00011 209 ProSiteProfiles Zinc finger C2H2 type domain profile. 13 35 IPR013087 -
Mupr1598g00011 209 SUPERFAMILY beta-beta-alpha zinc fingers 11 37 IPR036236 -
Mupr1598g00011 209 ProSitePatterns Zinc finger C2H2 type domain signature. 106 126 IPR013087 -
Mupr1598g00011 209 SMART c2h2final6 104 126 IPR013087 -
Mupr1598g00011 209 SMART c2h2final6 13 35 IPR013087 -
Mupr1598g00011 209 SMART c2h2final6 152 174 IPR013087 -
Mupr1598g00011 209 Gene3D Classic Zinc Finger 102 174 - -
Mupr1598g00011 209 ProSitePatterns Zinc finger C2H2 type domain signature. 15 35 IPR013087 -
Mupr1598g00011 209 ProSitePatterns Zinc finger C2H2 type domain signature. 154 174 IPR013087 -
Mupr1598g00011 209 SUPERFAMILY beta-beta-alpha zinc fingers 103 130 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1598g00011 Mupr-Chr1598 74261 75705 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1598g00011 13 190 C2H2 Transcription Factor Family AT4G35280 53.883 5.00e-63 195