Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15982g00001 ATGGAAACCCCAATATTCTTCACTCCATGCCCAAACAATGAATTCGAATACCCTTCCGACCAGTCTTGTGTATTTACATCACATAGTTACAAATCTCATATATCCACCAGTTTTAATGAAAATGGGTCCCAGGAAATGGTTGTTGAAGGAACACGATCATTATTACCTCGTTACGAAGAGAAACAAATTAAGGTTTCTTCGTACAGAGGGATCCGAAGGCGAGGGTGTGGTAACTACGCAGCGGAGATAAGGGACTCCACGAGGAATGGGGCCAGAGTTTGGTTGGGAACCTTCGACACTGCTGAGGAGGCTGCTATGGCTTACGATCAAGCTGCATTAACAGCGCGTGGCCAACACGCAGTTCTCAATTTCCCACGTGAACTCGTTCACCAGTCGCTTCAGGACATGAACTTTAGTTTCCAGAGAGGGTATTCACCCGTTTTGGAACTGAAGAAGCGCAACTTCATCAAGAGGAAGTTGGAGTGCAGGAAGACGAGGAAGAATCACCAACCGTTTCGGGCACAAAATGTTGTCGTATTGCAAGATTTGGGAGCAGATTATTTGGAAGAGCTTCTCACACTCTGCCAACATTCCACCTAG 600 0.4617 METPIFFTPCPNNEFEYPSDQSCVFTSHSYKSHISTSFNENGSQEMVVEGTRSLLPRYEEKQIKVSSYRGIRRRGCGNYAAEIRDSTRNGARVWLGTFDTAEEAAMAYDQAALTARGQHAVLNFPRELVHQSLQDMNFSFQRGYSPVLELKKRNFIKRKLECRKTRKNHQPFRAQNVVVLQDLGADYLEELLTLCQHST 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15982g00001 199 CDD AP2 66 125 IPR001471 GO:0003700|GO:0006355
Mupr15982g00001 199 PANTHER DNA-BINDING DOMAIN 49 192 IPR044808 GO:0003700|GO:0009873
Mupr15982g00001 199 SUPERFAMILY DNA-binding domain 66 126 IPR016177 GO:0003677
Mupr15982g00001 199 ProSiteProfiles AP2/ERF domain profile. 67 125 IPR001471 GO:0003700|GO:0006355
Mupr15982g00001 199 SMART rav1_2 67 131 IPR001471 GO:0003700|GO:0006355
Mupr15982g00001 199 Gene3D AP2/ERF domain 67 126 IPR036955 GO:0003700|GO:0006355
Mupr15982g00001 199 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700|GO:0006355
Mupr15982g00001 199 PRINTS Ethylene responsive element binding protein signature 91 107 IPR001471 GO:0003700|GO:0006355
Mupr15982g00001 199 FunFam Ethylene-responsive transcription factor 2 66 126 - -
Mupr15982g00001 199 Pfam AP2 domain 67 117 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15982g00001 Mupr-Chr15982 5610 6209 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15982g00001 38 198 AP2-EREBP Transcription Factor Family AT3G23240 45.355 4.06e-49 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr15982g00001 AP2 9.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15982g00001 K14516 - tcc:18600104 181.8