Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15979g00001 ATGAAATTCTCCATCATGCATGTTATAGCCCCTTCCCTCGACAAACTTGCAAATAGAGATGATGCTGAGGTGCTTAAAGCAATTGTGGATCTTTTATGGTCGAAGTTGGCTAAACCCCAAGTTAACTCGAAAGGACTTGTAGGAATTGATCAAAAAATTGCAGATGTAGAATCAATGATTCGCAAGCGCAAGGAGCCAAAAGACTTTTGTCTTGTTGGAATTTGTGGTATGGGCGGTATCGGCAAGACAACTCTCGCAGAACAAATATTTTACAAACTACAGTCTGAATATGAAGGTTCTTATTTTTTAGCCAATGAAAGAGAAGAATCAAGCAAACGTGGAATAGTTTCTTTGAAGAATGAAATTTTTTCTAGCCTATTAGGAGATGTCAAAATTAACACAGAGCGATCAATGCCCAATGATATTGTAAGAAGAATTGGTCGCATGAAAGTTCTCATTGTTCTTGATGACGTGAATGATTCAGATCACCTACAAGCTTTGTTGGGAACACTTGATAATTTTGGATCAGGCAGTAGAATAATTGTAACAACTAGAGATGAGCAAGTGCTTAATGCTAACAAAGCTGATGAGATATACCGGCTTTCAAAATTAAGTTTCAATGAAGCACTTGAACTTTTCAAATTGATCGCCTTTCGCCAAAGTGATCATCAAAGGGAGTATGATGTGCTATCAGAAAAGATGGTCCATTATGCCGAAGGTGTTCCATTAGTTCTTAAAGTTTTGGCTCGTCGTCTTTGTGGAAAAAATAAGGAAATATGGAAAAGTGAACTAGACAAGCTTGAAAAAATGCCTCCTACAGAAGTTTATGATGTAATGAAAATGAGTTATGATGATCTAGATCGTAAAGAGCAACAAATTTTCCTTGATCTTGCATGTTTTGTTCTCAGATTGCATAGAAAGGTAAATGTGGGGAATCTAAAATCTTTATTGAAAGATGATGAAAGTGACAATTCATCAGTGGTTGCTGTGTTAGAAAGGCTGAAAGATAAAGCTCTTGTAACTTTCTCTGAGGATAATTTTATATGTATGCATGATATGTTACAAGAAATGGGTTTGGAGATTGTTCGCCGACAATCTTGCAAACGCCCTGCAAGCACCAGTTGGTTGTGGGATCCCAATGACATTTGTGAAGCATTGAAAACTGACAAGAATCTGGTGAATTTGAAAGAGCTTGACCTCAATAGCTCTCCGATGTTAAAGGAGCTGCCAGATTTATCAAAAGCCACAAATCTTGAAGTGCTGATTCTCTGGGGTTGTTCACAGTTGACTGAGTTGCATCCATCTATTTTCTCTCTGGCCAAACTAAAGAAATTGGACGTTTGGAACTGCCAATCACTTACCACAGTAGTAAGATATTATTACCATTTATGCGGCAACAGATATCTAACCCATGATGATTGCAAGAACCTTTTGGAATTCTCACGGATGTCAAAGAATACAATTGCAGATCTCCGGTCATTTGGAAATTTGCATGTAACAAAAAGTGACCTTAAGATGTTACCTTCATGGTTGAACAATCTTACGCAACTACTACATCTAGAGGTAAGCCATTGCACGAAGCTTCAAACAATACCTGAACTTCCCCAACTCCTTAAAACTCTAGATGTTAGAAACTGCAATTCACTTGAGTCTCTACCAGAGCTTCCTGTGTCCCTTGAAAAGCTAGCTGTTGAGGAGTGTACTTTACTTAAGACTCTGTCAGAGTTTCCCCCATCCCTTAAAACTCTAGCGGCCACATATTGCAAATCACTTCAGACTCTGCCAGAGCTTCCCTCATCCCTTCAAACTCTAAATGTCAAATATTGCAAATCACTTCAGACTCTGCCAGAGCTTCCCTCATCCCTTCAAACTCTAGAAGTCCAATATTGCGAATTACTTCAAACCCTACCGAAACTTCCCCAGTTCATTAGAGATCTAAATCTCAAACATTGCAAATCACTTCAGACTCTACCAAAGCTTCCATTGTACCTTCAAACTCTAAATCTCCAGTGGTGCACTTCACTTCAAACTCTGCCAAAGCTACCCCTAACACTTGAAACTCTAGTTGCCCAAGAAGACAAATCATTGACAACTATATTGTTCCCTTCAACAACTGTTGAACAATTAAAGGAAAACAGGAGATGGGTTGTGTTTTGGAATTGCCTGAACTTGGATGAACATTCTCTAGCGGCTATTGGGTTGAATGCGCAAATCAACGTGATGAAATTTGCAAATCCACATCATTTTCAAAATGACTATGGTTATAGTTCTTCTCATGATCATTCTTACTTTCATAACCATCATTTGTATCAAGCTGTTTATGTGTATCCAGGAAGCAGTTTTCCAGAGTGGTTGGAGCATAAGACAACAAAAGATTATATAAATATTGATCTCTCTTCTGCTCCACCTTCCCCCCTCAGCTTCATTTTCTGCTTCGTCCTTGGTAAGTACCAAAATGGAGAGACGGTTAAAAAATTTGAATTTAACATCACTGAAAGTGTTGGTGATCGTTGGGGTAAAAAGGACAGTATAGAAATGTCAATTAATCGTGGGGGTAAAAAGGACAGTATGTTAATGTTGATGGATGGTTGGGATAAAAAGGATTGCTCTGGTTGCCTAATTGAATCAGATCATCTGTGTGTAATGTACGACCAAAGATGTTCTGCCTTCCTAAATAGGAGGGCCAAAAATCAAACAAAGCTTCAAATCCAGGTTACAATACGGGTGGTAACCTCCAACCATACTTATCCACCGCCAGAGCAGATTTTGAAAGGATTTGGTGTCAGCCCAGTAAGCACCTCAGAATATAACAGATTCATTCAACAAATGGAATTGACTCGTGCTTGGTATTATCCC 2856 0.3869 MKFSIMHVIAPSLDKLANRDDAEVLKAIVDLLWSKLAKPQVNSKGLVGIDQKIADVESMIRKRKEPKDFCLVGICGMGGIGKTTLAEQIFYKLQSEYEGSYFLANEREESSKRGIVSLKNEIFSSLLGDVKINTERSMPNDIVRRIGRMKVLIVLDDVNDSDHLQALLGTLDNFGSGSRIIVTTRDEQVLNANKADEIYRLSKLSFNEALELFKLIAFRQSDHQREYDVLSEKMVHYAEGVPLVLKVLARRLCGKNKEIWKSELDKLEKMPPTEVYDVMKMSYDDLDRKEQQIFLDLACFVLRLHRKVNVGNLKSLLKDDESDNSSVVAVLERLKDKALVTFSEDNFICMHDMLQEMGLEIVRRQSCKRPASTSWLWDPNDICEALKTDKNLVNLKELDLNSSPMLKELPDLSKATNLEVLILWGCSQLTELHPSIFSLAKLKKLDVWNCQSLTTVVRYYYHLCGNRYLTHDDCKNLLEFSRMSKNTIADLRSFGNLHVTKSDLKMLPSWLNNLTQLLHLEVSHCTKLQTIPELPQLLKTLDVRNCNSLESLPELPVSLEKLAVEECTLLKTLSEFPPSLKTLAATYCKSLQTLPELPSSLQTLNVKYCKSLQTLPELPSSLQTLEVQYCELLQTLPKLPQFIRDLNLKHCKSLQTLPKLPLYLQTLNLQWCTSLQTLPKLPLTLETLVAQEDKSLTTILFPSTTVEQLKENRRWVVFWNCLNLDEHSLAAIGLNAQINVMKFANPHHFQNDYGYSSSHDHSYFHNHHLYQAVYVYPGSSFPEWLEHKTTKDYINIDLSSAPPSPLSFIFCFVLGKYQNGETVKKFEFNITESVGDRWGKKDSIEMSINRGGKKDSMLMLMDGWDKKDCSGCLIESDHLCVMYDQRCSAFLNRRAKNQTKLQIQVTIRVVTSNHTYPPPEQILKGFGVSPVSTSEYNRFIQQMELTRAWYYP 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15979g00001 952 Pfam NB-ARC domain 56 273 IPR002182 GO:0043531
Mupr15979g00001 952 Gene3D Ribonuclease Inhibitor 376 485 IPR032675 -
Mupr15979g00001 952 Gene3D Ribonuclease Inhibitor 486 594 IPR032675 -
Mupr15979g00001 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 297 IPR027417 -
Mupr15979g00001 952 PRINTS Disease resistance protein signature 71 86 - -
Mupr15979g00001 952 PRINTS Disease resistance protein signature 145 159 - -
Mupr15979g00001 952 PRINTS Disease resistance protein signature 238 252 - -
Mupr15979g00001 952 PRINTS Disease resistance protein signature 390 406 - -
Mupr15979g00001 952 SMART LRR_bac_2 535 555 - -
Mupr15979g00001 952 SMART LRR_bac_2 640 660 - -
Mupr15979g00001 952 SMART LRR_bac_2 556 576 - -
Mupr15979g00001 952 SMART LRR_bac_2 598 618 - -
Mupr15979g00001 952 SMART LRR_bac_2 392 412 - -
Mupr15979g00001 952 SMART LRR_bac_2 619 639 - -
Mupr15979g00001 952 SMART LRR_bac_2 577 597 - -
Mupr15979g00001 952 Gene3D Ribonuclease Inhibitor 595 729 IPR032675 -
Mupr15979g00001 952 SUPERFAMILY L domain-like 386 662 - -
Mupr15979g00001 952 SUPERFAMILY "Winged helix" DNA-binding domain 273 387 IPR036390 -
Mupr15979g00001 952 Gene3D - 34 198 IPR027417 -
Mupr15979g00001 952 Gene3D - 203 287 IPR042197 -
Mupr15979g00001 952 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 546 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15979g00001 Mupr-Chr15979 486 3835 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15979g00001 47 741 WRKY Transcription Factor Family AT5G45050 27.092 5.22e-50 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15979g00001 - - gmx:100817068 793.112