Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15973g00002 ATGGTTGTGGCAATTGTTATCCCAATTGCTATTTTGCTGCCACTTTTGATTATAGGATGGTGTTGGTTGCGAAGAAGTCGAAACAAAAACCGTGAGGCTGTCCTGGAAGTGAATGATAGCATTAGGAAATATTTGACAAGTGATGAAGAGTCTTTTCATTTTGACTTGGCTACAATTGAAGCTGCCACAGACAGATTCTCGAATGAGATGAAGATTGGAGAAGGTGGATTTGGTGTTGTTTATAAGGGTACCTTACCTAATGGACAAGAGATAGCTGTTAAGAGGCTATCAAGAACCTCCCTCCAAGGTGACGTAGAATTCAGGAACGAGGCTGCACTAGTTGCACAGCTTCAACACAGAAATTTAGTTAGACTGTTAGGATTTTGCTTGGAGGGAACGGAGAGGATACTAGTTTATGAATTTATCCCAAATTCCAGCCTTGATCACTTTCTATTCGGTCATGAAAACCAAGGAGAACTAGACTGGGACAGACGTTACAGTATTATAGTTGGGATTGCCCGGGGAATTCAGTATCTCCATGAAGATTCTAGGCTAAGAGTCATACACCGTGATCTCAAAGCTAGCAATGTTCTATTAGATGCTTATATGAATCCTAAGATTTCAGATTTTGGGATGGCAAAGATATTTTATGGAGATCAAAGTCAAGAAAATACAAGAACAGGAAGGATAGTTGGAACTTAG 702 0.4003 MVVAIVIPIAILLPLLIIGWCWLRRSRNKNREAVLEVNDSIRKYLTSDEESFHFDLATIEAATDRFSNEMKIGEGGFGVVYKGTLPNGQEIAVKRLSRTSLQGDVEFRNEAALVAQLQHRNLVRLLGFCLEGTERILVYEFIPNSSLDHFLFGHENQGELDWDRRYSIIVGIARGIQYLHEDSRLRVIHRDLKASNVLLDAYMNPKISDFGMAKIFYGDQSQENTRTGRIVGT 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15973g00002 233 Gene3D Transferase(Phosphotransferase) domain 1 142 233 - -
Mupr15973g00002 233 Pfam Protein tyrosine and serine/threonine kinase 69 227 IPR001245 GO:0004672|GO:0006468
Mupr15973g00002 233 ProSiteProfiles Protein kinase domain profile. 66 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr15973g00002 233 ProSitePatterns Protein kinases ATP-binding region signature. 72 94 IPR017441 GO:0005524
Mupr15973g00002 233 SMART serkin_6 66 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr15973g00002 233 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 233 - -
Mupr15973g00002 233 FunFam Os07g0541700 protein 142 233 - -
Mupr15973g00002 233 Gene3D Phosphorylase Kinase; domain 1 26 141 - -
Mupr15973g00002 233 SUPERFAMILY Protein kinase-like (PK-like) 49 233 IPR011009 -
Mupr15973g00002 233 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Mupr15973g00002 233 FunFam Cysteine-rich receptor-like protein kinase 10 24 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15973g00002 Mupr-Chr15973 6438 7444 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15973g00002 1 233 Receptor kinase-like Gene Family AT4G23230 59.657 5.47e-90 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr15973g00002 PK_Tyr_Ser-Thr 4.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15973g00002 - - ccaj:109806163 387.882