Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1596g00003 ATGGCCATGGCTGCTGCTCTGCGTCGCGAAGGGAGGCGTTTGGCCCAACCAATCACCGCTCTCCAATCCTCTCTCATCTCTCAAGACCAAGCTCCTCATGGCGCGCGCTCCATTTCCACTCAAGTAGTGAGAAACCGAATGAAGAGTGTGAAGAATATCCAGAAAATCACCAAGGCCATGAAGATGGTTGCCGCATCCAAGCTGCGAGCCGTTCAGACAAGAGCTGAAAATTCTCGTGGCCTCTGGCAACCATTCACTGCTCTTCTCGGTGACAATCCCAGTGCTGATGTTAAGAAGAGTGTTGTTGTTACCATTTCTTCGGACAAAGGTCTTTGTGGTGGAATCAATTCCACGTCTGTCAAGATAAGCAGGGTTTTGCACAAATTGAATTCTGGGCCCGATAAAGAGACAAAATATGTCATATTGGGAGAGAAGGCTAAGGCTCAATTGCTGCGTGACTCAAAGAAGGACATTGACCTCTGCCTAACTGAATTGCAGAAATATCCCCTGAATTATACCCAGGTGTCCGTCTTGGCAGATGACATTCTAAAGAATGTGGAGTATGACGCATTAAGGATTGTTTTCAACAAATTTCATTCCGTTGTACAATTTTTGCCAACAGTGTCAACTGTACTATCACCTGAGGTTATTGAGAAAGAGGCTGAATCAGGAGGAAAGCTAGGGGAACTGGATTCGTATGAGATTGAAGGTGGCGAGACAAAATCTGAAATTCTTCAGAATCTGTCAGAGTTCCAGTTTTCTTGTGTCATGTACAATGCGGTGTTGGAGAATGCTTGCAGTGAGCAAGGAGCAAGAATGTCTGCCATGGACAGCTCTAGCAGAAACGCTGGGGAGATGCTTGATCGTCTCACTCTCACCTATAACAGAACTCGTCAAGCATCAATCACCACTGAATTGATAGAGATTATCTCTGGTGCTTCAGCATTGGAAGATGGAATTTGA 963 0.4569 MAMAAALRREGRRLAQPITALQSSLISQDQAPHGARSISTQVVRNRMKSVKNIQKITKAMKMVAASKLRAVQTRAENSRGLWQPFTALLGDNPSADVKKSVVVTISSDKGLCGGINSTSVKISRVLHKLNSGPDKETKYVILGEKAKAQLLRDSKKDIDLCLTELQKYPLNYTQVSVLADDILKNVEYDALRIVFNKFHSVVQFLPTVSTVLSPEVIEKEAESGGKLGELDSYEIEGGETKSEILQNLSEFQFSCVMYNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEDGI 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1596g00003 320 Gene3D - 63 275 - -
Mupr1596g00003 320 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 40 316 IPR035968 GO:0015986|GO:0045261|GO:0046933
Mupr1596g00003 320 PRINTS ATP synthase gamma subunit signature 263 282 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mupr1596g00003 320 PRINTS ATP synthase gamma subunit signature 294 315 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mupr1596g00003 320 PRINTS ATP synthase gamma subunit signature 189 206 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mupr1596g00003 320 PRINTS ATP synthase gamma subunit signature 97 116 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mupr1596g00003 320 FunFam ATP synthase subunit gamma 63 275 - -
Mupr1596g00003 320 NCBIfam ATP synthase F1 subunit gamma 39 316 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mupr1596g00003 320 CDD F1-ATPase_gamma 39 313 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mupr1596g00003 320 PIRSF ATP_synthase_gamma 6 316 - -
Mupr1596g00003 320 Pfam ATP synthase 41 316 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mupr1596g00003 320 Gene3D ATP synthase, gamma subunit, helix hairpin domain 43 313 - -
Mupr1596g00003 320 ProSitePatterns ATP synthase gamma subunit signature. 302 315 IPR023632 -
Mupr1596g00003 320 PANTHER ATP SYNTHASE GAMMA CHAIN 28 316 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1596g00003 Mupr-Chr1596 12474 18929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1596g00003 43 318 Primary Pumps ATPases AT1G15700 31.804 6.25e-33 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1596g00003 K02136 - gmx:100790402 559.681