Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15966g00002 ATGATGAATCAGCGACAGCGAGAGAAGCTGCTTCACAAAACCGAGACCTGTGGTTTGGTGGCAGGTGTTGGTGCGGAGCTAGGCATTGTCACCGGGCCAGGGGACAACAACAACGTTAGCAGCATATCTCAGTCTAACGGGTCGGGTCGGATCCACGACGATAACCACCTTGGTCTTGTTGCCGCAGTTACAACCTTTGGAACTGTTCAGAGGAAGAAAAGAACCATGACCAGGCAAAGAAGATCCACCACCACAAACACTTACCCCACTTTGCTGCATCTCAACAACAATAAGCACAAGCCACTTCGTTTTCCACCTCTGAGTCCTTCCGCGTCCTCGCACGTGCCACTCCCCTCACCCCCGCCTGATAAACCCTCCACAACTCTCCCGCAAGCACGTGTGAGTTATCACCCCCTTTTATTTTTCTCAAATTTGTTTCTTTCTCCACTCTCAAGATCTCATGAAATCGATCATAGAAGGTTGAGATTCCTTTTCCAAAAGGAGTTAAAGAACAGTGATGTTAGCTCCCTTAGGAGAATGATATTGCCAAAGAAAGCAGCAGAAGCTTTCCTTCCTGCCCTTGACTCAAAAGAAGGAATTATAATGAGCATGGATGATATAGACGGTCTTCATGTATGGAGTTTCAAGTACAGGTTTTGGCCTAACAATAATAGCCGGATGTATGTTCTTGAAAATACTGGAGACTTTGTCAACACACATGGCCTACGCTTTGGAGATTCCATCATGGTTTACCAAGATATTCAAAACAATAATTATGTTATTCAGGCTAAAAGGGCTTCTGATCGGGATGAATTTATGGAAGAAACAAGTGATACCATCAATGACATCTTCCTTAGTGATTTTGAGGTGAACAAACCTGGTTGCTTCAATGTAACCTATCCTCCAGTGAATGATACAGGCATGTCTTTCATATATGACACTACCTTCTCAAATGACTCCCCACTTGATTTTTTGGGTGGATCAATGACCAATTTTTCAAGGATTGGACCAGTTGAAACCTTTGGCTCTGTTGAGAATTTGTCACTTGATGACTTCTATTAA 1062 0.4379 MMNQRQREKLLHKTETCGLVAGVGAELGIVTGPGDNNNVSSISQSNGSGRIHDDNHLGLVAAVTTFGTVQRKKRTMTRQRRSTTTNTYPTLLHLNNNKHKPLRFPPLSPSASSHVPLPSPPPDKPSTTLPQARVSYHPLLFFSNLFLSPLSRSHEIDHRRLRFLFQKELKNSDVSSLRRMILPKKAAEAFLPALDSKEGIIMSMDDIDGLHVWSFKYRFWPNNNSRMYVLENTGDFVNTHGLRFGDSIMVYQDIQNNNYVIQAKRASDRDEFMEETSDTINDIFLSDFEVNKPGCFNVTYPPVNDTGMSFIYDTTFSNDSPLDFLGGSMTNFSRIGPVETFGSVENLSLDDFY 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15966g00002 353 MobiDBLite consensus disorder prediction 111 127 - -
Mupr15966g00002 353 CDD B3_DNA 163 265 IPR003340 GO:0003677
Mupr15966g00002 353 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 68 273 IPR044800 GO:0003700
Mupr15966g00002 353 MobiDBLite consensus disorder prediction 70 129 - -
Mupr15966g00002 353 Pfam B3 DNA binding domain 165 265 IPR003340 GO:0003677
Mupr15966g00002 353 SUPERFAMILY DNA-binding pseudobarrel domain 163 259 IPR015300 -
Mupr15966g00002 353 SMART B3_2 165 267 IPR003340 GO:0003677
Mupr15966g00002 353 ProSiteProfiles B3 DNA-binding domain profile. 165 267 IPR003340 GO:0003677
Mupr15966g00002 353 Gene3D - 161 279 IPR015300 -
Mupr15966g00002 353 MobiDBLite consensus disorder prediction 80 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15966g00002 Mupr-Chr15966 4757 8015 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15966g00002 39 353 B3 DNA Binding Superfamily AT3G26790 47.278 2.57e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mupr15966g00002 B3 3.8e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15966g00002 K09287 - gmx:100813055 481.1