Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1595g00008 ATGCAAGTTCTTCGTCACATCATGTATTTCGTTGTAGTATTTTATTTTCTGTTCCTAAACCCTTGCCATTGTTTCAATCTGAAACTACTTAATGTTTCCAAAATCCAAAACAAGGATCAATGGCAAATAGCAGCAGCTACATGGTTCGGAGCACCCAACGGTGGTGGGTCGAATGGGGGTGCTTGTGGATATGTTGATAGTGTGGAGAAACCTCCACTCTCAAAAATGGTATCAGCTGGAGGTCCTTCTCTTTTCAATGGCGGCAGAGGATGCGGGGCTTGTTATGAGCCGGAAATGGAGTGTAGGTTTAACATTATTTCCTTGAGGAATGTCACTGATGTCTACGTGAAATGCACAGAAAATGCTGCATGCTCGGGAAAGCCAGTGAGCGTGATGATAAGTGATGAATGTGCTGGCTGTACCTTACGATCAGTCCATTTTGATCTCAGTGGCACTGCCTTTGGTTCCATGGCAGCTCCAAACCTCGCAGACAATCTTCGCAACGCTGGAAAGCTTAATATTCTCTACAGAAGGGTTGCATGCTCCTTTGGGAAGTCTATAGCCTTTATCATAGACGATGGGGCGAACCCATACTATTTTGCTACAGAAATAGAATACGAAAATGGAGATGGTGACCTCGTGGACATTGAGTTGAAGCAAGCTAATTCTGACACGTGGCATTCTATGCAGCGTTCATGGGGTGCAAGATGGGCTTTGAACTTAGGTTTACGATTGCAAGCACCATTCTCTATTAAGCTCACAGAAAATGGCAAGAACAGTAACAAGACCATTGTGGCTGATGCTGTAATTCCACGTGCCTGGCAACCTGGCCAAGTTTATCGATCTCTCATCAATTTC 858 0.4452 MQVLRHIMYFVVVFYFLFLNPCHCFNLKLLNVSKIQNKDQWQIAAATWFGAPNGGGSNGGACGYVDSVEKPPLSKMVSAGGPSLFNGGRGCGACYEPEMECRFNIISLRNVTDVYVKCTENAACSGKPVSVMISDECAGCTLRSVHFDLSGTAFGSMAAPNLADNLRNAGKLNILYRRVACSFGKSIAFIIDDGANPYYFATEIEYENGDGDLVDIELKQANSDTWHSMQRSWGARWALNLGLRLQAPFSIKLTENGKNSNKTIVADAVIPRAWQPGQVYRSLINF 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1595g00008 286 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 59 186 IPR007112 -
Mupr1595g00008 286 SUPERFAMILY Barwin-like endoglucanases 38 183 IPR036908 -
Mupr1595g00008 286 SUPERFAMILY PHL pollen allergen 185 282 IPR036749 -
Mupr1595g00008 286 Gene3D - 27 182 IPR036908 -
Mupr1595g00008 286 PANTHER EXPANSIN-B3 19 286 - -
Mupr1595g00008 286 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 198 282 IPR007117 -
Mupr1595g00008 286 Pfam Lytic transglycolase 78 176 IPR009009 -
Mupr1595g00008 286 Gene3D - 183 286 IPR036749 -
Mupr1595g00008 286 PRINTS Expansin/Lol pI family signature 268 282 IPR007118 GO:0005576
Mupr1595g00008 286 PRINTS Expansin/Lol pI family signature 81 99 IPR007118 GO:0005576
Mupr1595g00008 286 PRINTS Expansin/Lol pI family signature 40 55 IPR007118 GO:0005576
Mupr1595g00008 286 PRINTS Expansin/Lol pI family signature 226 240 IPR007118 GO:0005576
Mupr1595g00008 286 PRINTS Expansin/Lol pI family signature 58 76 IPR007118 GO:0005576
Mupr1595g00008 286 Pfam Expansin C-terminal domain 187 271 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1595g00008 Mupr-Chr1595 78681 81278 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1595g00008 20 286 Expansin Gene Family AT1G65680 50.741 4.52e-91 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1595g00008 - - gmx:100786475 412.535