Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1595g00007 ATGGCTTTGATATTGGATCAACAATCAAACTTCAAGCACTTTTGTAAAATTTGCAAGAAAGGTTTTGGTTGTGGAAGAGCTTTGGGAGGACACATGAGGGCTCATGGCATAGGAGACGAGAGTGGTCAAATGGATGATGATGATCAAGCAAGTGATTGGGAAGATAGGTTAGGTGGCAATGTGCCACCAAGCAACAAACGTATGTATGCTCTAAGAACAAACCCTAATAGGCTAAAGAGTTGTAGGGTATGTGAGAATTGTGGCAAAGAGTTCTTGTCTTGGAAATCCTTCCTTGAACATGGTAAATGCACCTCAGAGGATGCCGAGTCCTTAGTATCGTCTCCTGGATCCGACGCAGACGACGGTGGCATCGGGGGCGGCCGGAGAGGATGTGGTTGGTCCAAAAGAAAAAGATCGTTAAGAACTAAGGTTGGTAGCTTCAATAATAATTGTCCATCAAGCGAGGATGAAGACCTAGCAAATTGTTTAATGATGTTATCCAATGCCATTGTAGATCCTCTTGTGGCTGAGCCCGAAGAATCTTGTGCATCCGCTAGCAAAGAGGAGGAACAAAGAAGAAATCCTATGAACTTCATTGCGCCATTATCGTACAAAATTAATAACAATAGTAATAACAACCACAACAACAACCTCGTTGACAACAAGGCCAAAGGGGTTGCCAAGGGTTTGTTTGAATGTAAAGCATGCAAAAAGGTTTTCAATTCCCACCAAGCATTGGGTGGCCATAGAGCAAGCCATAAAAAGGTTAAGGGTTGTTTTGCTGCAAGATTAGACAACCTTGATGACAATCTCACCGAAGATGATGTCATCACACATGAAGAGTTTTTTCCCTCAAAATCAAACTCCACTCTCCAATTAGAGCATGGCTCCAATCCCACATTGGCTTCTTCTTCCAAGAGAAAATCCAAAGTTCACGAATGCTCCATTTGTCATAGGAGTTTCTCTTCAGGACAAGCATTGGGGGGACACAAAAGGTGTCATTGGATCACATCAAATGCCCCTGACACCTCCACATTAACGAGATTTCAACAATTTCAAGAACACATGGATCAAATACCCAAATTTGACACCTCTTCTGAGTCTCTTGATCTTAAGTTAGACCTTAACCTTCCTGCACCCACCAATGACCTTGCAAGAAGGAACGTCTCCACGGAAATTTACTTGCAACCTTGGGTTGCATCAAAGGATATTGTTAAAGATGATAACAATAGCCAGTGTCAAAGTCTCCACCACCACAATACCAATAATGTTGATATTGACAATGATGAGGACAAAAATAACAATAACTCAATGCAAAACGTGGATAATGAAGCCGATAGTAAGATCAAATTGGCGAAACTAAGTGAGCTAAAGGACATGAACATTGGTGGAAGTTCTTCGCCTTGGTTGCAAGTGGGAATCGGATTGCATTTAGCAATTGCCGTGGAGTTCTTCTTTTTCTTCTTTATTACTAAGCACACGTCGGAAATAAAAAATAATTCAAAGGTTGAGATTAAGTTGAAAAAAAATGTAAAGGATCGTGATCTGTACGTTGTGTTTTATGGTGCTAACAGGGTTGATACATTTGTTCGACTTTTAGGGTCACACTAA 1611 0.4115 MALILDQQSNFKHFCKICKKGFGCGRALGGHMRAHGIGDESGQMDDDDQASDWEDRLGGNVPPSNKRMYALRTNPNRLKSCRVCENCGKEFLSWKSFLEHGKCTSEDAESLVSSPGSDADDGGIGGGRRGCGWSKRKRSLRTKVGSFNNNCPSSEDEDLANCLMMLSNAIVDPLVAEPEESCASASKEEEQRRNPMNFIAPLSYKINNNSNNNHNNNLVDNKAKGVAKGLFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNLDDNLTEDDVITHEEFFPSKSNSTLQLEHGSNPTLASSSKRKSKVHECSICHRSFSSGQALGGHKRCHWITSNAPDTSTLTRFQQFQEHMDQIPKFDTSSESLDLKLDLNLPAPTNDLARRNVSTEIYLQPWVASKDIVKDDNNSQCQSLHHHNTNNVDIDNDEDKNNNNSMQNVDNEADSKIKLAKLSELKDMNIGGSSSPWLQVGIGLHLAIAVEFFFFFFITKHTSEIKNNSKVEIKLKKNVKDRDLYVVFYGANRVDTFVRLLGSH 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1595g00007 536 SMART c2h2final6 231 253 IPR013087 -
Mupr1595g00007 536 SMART c2h2final6 312 334 IPR013087 -
Mupr1595g00007 536 SMART c2h2final6 13 35 IPR013087 -
Mupr1595g00007 536 ProSiteProfiles Zinc finger C2H2 type domain profile. 231 258 IPR013087 -
Mupr1595g00007 536 MobiDBLite consensus disorder prediction 410 443 - -
Mupr1595g00007 536 SUPERFAMILY beta-beta-alpha zinc fingers 13 101 IPR036236 -
Mupr1595g00007 536 MobiDBLite consensus disorder prediction 37 60 - -
Mupr1595g00007 536 SUPERFAMILY beta-beta-alpha zinc fingers 230 334 IPR036236 -
Mupr1595g00007 536 ProSiteProfiles Zinc finger C2H2 type domain profile. 312 334 IPR013087 -
Mupr1595g00007 536 ProSitePatterns Zinc finger C2H2 type domain signature. 233 253 IPR013087 -
Mupr1595g00007 536 MobiDBLite consensus disorder prediction 287 305 - -
Mupr1595g00007 536 Pfam C2H2-type zinc finger 231 255 - -
Mupr1595g00007 536 Pfam C2H2-type zinc finger 311 336 - -
Mupr1595g00007 536 Pfam C2H2-type zinc finger 13 35 - -
Mupr1595g00007 536 Gene3D Classic Zinc Finger 228 334 - -
Mupr1595g00007 536 MobiDBLite consensus disorder prediction 108 130 - -
Mupr1595g00007 536 ProSitePatterns Zinc finger C2H2 type domain signature. 314 334 IPR013087 -
Mupr1595g00007 536 PANTHER OS02G0659100 PROTEIN 2 477 - -
Mupr1595g00007 536 ProSitePatterns Zinc finger C2H2 type domain signature. 15 35 IPR013087 -
Mupr1595g00007 536 MobiDBLite consensus disorder prediction 287 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1595g00007 Mupr-Chr1595 67858 70265 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1595g00007 135 377 C2H2 Transcription Factor Family AT1G02040 35.246 2.34e-30 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr1595g00007 zf-C2H2_6 1.8e-12 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1595g00007 - - gmx:100793846 822.387