Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1595g00006 ATGGAGAAGCACAAGTGCAAGCTTTGCTTAAGGAGCTTCGCTAATGGAAGAGCTTTGGGAGGTCACATGAGGTCTCACATGATGAACCTACCAGTTCCTCCCAAGGCGAACGAGTACGCCCCGGTTCAACTCAGTTTTGAGGCCGAGTCATCTCCTTCTCAATCTTCCTCCTCCTTCTACACACTCAGAGAGAATCCTAAGAAAAGCTTTCGCGTGGCGGATCCTGAATTTTCCTTCGCTGCTGACACAGGCTCCGTGATCCTTCAAGATAGAGAGAGCGAGACCGAGTCATCCAAGAAACCAACTCGGCGACGATCCAAGCGCGCGTGGCAACTCGGTTGTTCGCCAAAAAAAATGAAACTTAACAAGAGCGAATCTGCAAGCTCGGCTTCAGACACATCTGAAGAAAACGTTGCATTTTCTCTCATGATGCTGTCTCGCGATAAGTGGAGGAAAGATAAACACTACGAGACAGAACAACAACAACATAAACACTACGAGACAGAACAACATCAACAACATCAATTTGATGATGACGACGAAGACGACGTGGTTGAAGTTGAAGAAGAAGAAGATAGTTATGCATCTGAAGAACCGAAGTTTCCTAAGAAGAATAACAAGGTGCGAGGAAAATACAAATGCGAAACGTGTGATAAGGTGTTTCGATCTTACCAGGCCTTGGGAGGACACAGAGCAAGTCACAAGAAAGTGGTGATCAAGTTAAACTGTGAGAACGAAGGTGAACTTGAGTTGGAGCATGCTGTTGTTGCAGAGAAGAAAATCCACGAATGTCCGGTTTGTTCTAGAGTCTTCGCTTCTGGTCAGGCTCTCGGTGGACACAAGAGAACTCATGTGATTGGTTCTGCAACAACCACAACTGCAATCGCGACTTTAACTGATTCTGTTAGAACTTCTGCAACTGCTTCGGTAAGAATTTCTACTAGAGTTGGAAATAGTTTCATAGATCTCAATCTCCCTGCTCCAATGGACGAAAACGAAGATGGTAGTCAGTTCGAAAATTCTGCTGTTTCAGATGCAGAATTTGAAGTTGATCAACCTACATATTTTATTGATAGAAAAGTATCTTCCACTTCTGACACCGGCATTGTGCACTTCAGGAAGAAGAATATGTTTGGTCAATTAGTAGTTAACCCACTGTATCATCCTAGCAGAGACACATAG 1182 0.4425 MEKHKCKLCLRSFANGRALGGHMRSHMMNLPVPPKANEYAPVQLSFEAESSPSQSSSSFYTLRENPKKSFRVADPEFSFAADTGSVILQDRESETESSKKPTRRRSKRAWQLGCSPKKMKLNKSESASSASDTSEENVAFSLMMLSRDKWRKDKHYETEQQQHKHYETEQHQQHQFDDDDEDDVVEVEEEEDSYASEEPKFPKKNNKVRGKYKCETCDKVFRSYQALGGHRASHKKVVIKLNCENEGELELEHAVVAEKKIHECPVCSRVFASGQALGGHKRTHVIGSATTTTAIATLTDSVRTSATASVRISTRVGNSFIDLNLPAPMDENEDGSQFENSAVSDAEFEVDQPTYFIDRKVSSTSDTGIVHFRKKNMFGQLVVNPLYHPSRDT 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1595g00006 393 SUPERFAMILY beta-beta-alpha zinc fingers 212 284 IPR036236 -
Mupr1595g00006 393 ProSitePatterns Zinc finger C2H2 type domain signature. 264 284 IPR013087 -
Mupr1595g00006 393 ProSiteProfiles Zinc finger C2H2 type domain profile. 212 234 IPR013087 -
Mupr1595g00006 393 SMART c2h2final6 212 234 IPR013087 -
Mupr1595g00006 393 SMART c2h2final6 4 26 IPR013087 -
Mupr1595g00006 393 SMART c2h2final6 262 284 IPR013087 -
Mupr1595g00006 393 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 1 350 IPR044303 GO:0006355
Mupr1595g00006 393 ProSitePatterns Zinc finger C2H2 type domain signature. 6 26 IPR013087 -
Mupr1595g00006 393 MobiDBLite consensus disorder prediction 121 135 - -
Mupr1595g00006 393 MobiDBLite consensus disorder prediction 88 135 - -
Mupr1595g00006 393 ProSiteProfiles Zinc finger C2H2 type domain profile. 4 31 IPR013087 -
Mupr1595g00006 393 MobiDBLite consensus disorder prediction 152 202 - -
Mupr1595g00006 393 Pfam C2H2-type zinc finger 262 284 - -
Mupr1595g00006 393 Pfam C2H2-type zinc finger 212 236 - -
Mupr1595g00006 393 Pfam C2H2-type zinc finger 4 27 - -
Mupr1595g00006 393 MobiDBLite consensus disorder prediction 152 178 - -
Mupr1595g00006 393 ProSitePatterns Zinc finger C2H2 type domain signature. 214 234 IPR013087 -
Mupr1595g00006 393 ProSiteProfiles Zinc finger C2H2 type domain profile. 262 284 IPR013087 -
Mupr1595g00006 393 Gene3D Classic Zinc Finger 209 284 - -
Mupr1595g00006 393 MobiDBLite consensus disorder prediction 179 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1595g00006 Mupr-Chr1595 48425 50690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1595g00006 1 339 C2H2 Transcription Factor Family AT3G60580 41.972 9.65e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr1595g00006 zf-C2H2_6 2e-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1595g00006 - - gmx:100776462 409.068