Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1595g00002 ATGGATTATTCCGGCTACAACTACCAGCAGCAACCGCAACAACATTCCTATGGCTACGACCCTTCTCAGATCCAAATCCAACCCTACGATCAATCCTACGGCTACCAACAATACTATGCATACAATCCCCAATATGCTTATTTCCCCAACGCAAATCAACCCCAATTTCAATTTCAACCCGAACCCGCTCCGCTTCACCCTCCCGGCGTCAACCCAACCGCTTCCGAACCTGCCCTGACTGGGCCATCTCAATACAGAGGTAGGGGTGGCAGGGGTGGTAGACCATTTAGAGGGGCTGCTCGGGGTCGAGGCCATGGTAGGGGACATGGAGTGGGTGGTGGTAGACACATACCATCTCATTCTTCTGGACCTGCTATTTCTAATGTGCCAGGTGCACCAGTTGCTACTGGGGCTACTTCAGTGACAGAACCTTTATCATCAGTCTCTGCACAAACACAATTACCGAAACCAGCTCGAGTGCAACCACGTAAGGCATGTTGTGAAATTTGTAATGTTGAGTGCAATACTCCAGAAATCTTGGAGCAACACAAGAATGGGAAGAAACATCAGAAGAATATGAGGGTGCATGAAGAATTGCAAAGGCGCAATGCAATAAATGGACAACAGAGTGGGCAGATTCCTACCTCTCAATTGAATTTAACAGATCAACCTAAGAAAGTTCAGGAATCTGAGAAAAATGGATGCCCCACACAAAATATGGCCTCGGAAGAGGTTGATGAATTTATAATTGGACTTCCAAAATCTTCTGATGGAAAGGAAACAGCACAGTCGAACAAAGTCCGAAGTGTTGCTGGAAGGCTTGCTGTTCGAGCTGCTGAGAGGGGTTGGAGAGTATATCTACAGGATGAACATGGGACAACAACAGAAGCCGTAGATCGAATGATCAACATGGGTTTAAGTAAGTCCTCTCAGCAGAAGAAAGTTGATGCCTTTGCTGCCATGGTTGAGTGTATTACTCAACAAGACTTGGAGAAAAGTGGGAAGAAACATCAGAAGAATATGAGGGTGCATAAGTCTTTTACATGTTTGTTGTGCAATTTAAAATGTGATTCAGAAGCTAAATACCAGAGTCACTTGACTGGGAAAAAGCACTTATCAAAGCTACGTCCACATTTTACATGTGCATTGTGCGATTTTAATTGTGCTTCACAAGTTGCATACGAGAGTCACTTGACTGGGAAACAGCACTTATCAAAGCTACGAGTATCTTTTACATGTAGGTTGTGTGATGTTAAATGCGAGACACAATTTGCATATGAGAGTCACTTGGCCGGAAAATTTCACTTATCAAGACTAAGTGACGGGTATAAATGTGAGGTGTGTGATGTTAAGTTTGATGGAAAAGGTAATTACAAGAACCATCTGAATGGGAGAAATCACTTATGTAAAGCAAAGCTTGTTCATGATACCCAAGTTTTGTTTGGAGGTCTGCAATCTGTGTCTGAAGGACACATGGGCGTTCAAATACTTCACCCACTTGACATCAATGCTCTGTCTAATGCAATTAATGCTCGAGTCCAACAAGGTGAGAATAGTCCACAGGTACTTTTGGCTCAGCTCATGATGACTGTATTATCTAAAACACCAGCTCCAGCAACAGCACAAGTGACAGGCACCATGGCTGATCAGATACCAGCACCCACATCTTTAGCTGGACCAAGTGATGAACCCCAGTTGTTGCAGACACAAGTATCAGAAATCACAGCACATGTTGAGATGGAAAATCCTTCTGAGGAAACAAAAACTGAGCCGATATCTGTCCAACTGGGGTCAAACGCCCAGCCAGGTTCAAGTTTCAGCACCCAAATTGAAGGTGGAGGTTGTGAAGCTAAACAAACAGGTGTAAAATTTCCCCAAGATGGTTCTAGTGTGATACCCGCAGCGGATTCAGGTGCCGCAAATGACCAAATACCTTCTGAA 1941 0.4431 MDYSGYNYQQQPQQHSYGYDPSQIQIQPYDQSYGYQQYYAYNPQYAYFPNANQPQFQFQPEPAPLHPPGVNPTASEPALTGPSQYRGRGGRGGRPFRGAARGRGHGRGHGVGGGRHIPSHSSGPAISNVPGAPVATGATSVTEPLSSVSAQTQLPKPARVQPRKACCEICNVECNTPEILEQHKNGKKHQKNMRVHEELQRRNAINGQQSGQIPTSQLNLTDQPKKVQESEKNGCPTQNMASEEVDEFIIGLPKSSDGKETAQSNKVRSVAGRLAVRAAERGWRVYLQDEHGTTTEAVDRMINMGLSKSSQQKKVDAFAAMVECITQQDLEKSGKKHQKNMRVHKSFTCLLCNLKCDSEAKYQSHLTGKKHLSKLRPHFTCALCDFNCASQVAYESHLTGKQHLSKLRVSFTCRLCDVKCETQFAYESHLAGKFHLSRLSDGYKCEVCDVKFDGKGNYKNHLNGRNHLCKAKLVHDTQVLFGGLQSVSEGHMGVQILHPLDINALSNAINARVQQGENSPQVLLAQLMMTVLSKTPAPATAQVTGTMADQIPAPTSLAGPSDEPQLLQTQVSEITAHVEMENPSEETKTEPISVQLGSNAQPGSSFSTQIEGGGCEAKQTGVKFPQDGSSVIPAADSGAANDQIPSE 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1595g00002 647 Gene3D - 230 342 IPR037027 GO:0006139
Mupr1595g00002 647 SUPERFAMILY beta-beta-alpha zinc fingers 345 377 IPR036236 -
Mupr1595g00002 647 MobiDBLite consensus disorder prediction 1 20 - -
Mupr1595g00002 647 MobiDBLite consensus disorder prediction 58 112 - -
Mupr1595g00002 647 Pfam Zinc-finger of C2H2 type 347 371 - -
Mupr1595g00002 647 Pfam Zinc-finger of C2H2 type 443 467 - -
Mupr1595g00002 647 Pfam Zinc-finger of C2H2 type 411 435 - -
Mupr1595g00002 647 Pfam Zinc-finger of C2H2 type 167 189 - -
Mupr1595g00002 647 Pfam Zinc-finger of C2H2 type 379 403 - -
Mupr1595g00002 647 ProSitePatterns Zinc finger C2H2 type domain signature. 445 467 IPR013087 -
Mupr1595g00002 647 SUPERFAMILY beta-beta-alpha zinc fingers 150 197 IPR036236 -
Mupr1595g00002 647 Pfam Holliday junction resolvase 240 322 IPR005227 GO:0006364
Mupr1595g00002 647 CDD YqgF 243 322 IPR005227 GO:0006364
Mupr1595g00002 647 Gene3D Classic Zinc Finger 148 198 - -
Mupr1595g00002 647 Gene3D Classic Zinc Finger 378 409 - -
Mupr1595g00002 647 Gene3D Classic Zinc Finger 441 474 - -
Mupr1595g00002 647 Gene3D Classic Zinc Finger 410 440 - -
Mupr1595g00002 647 Gene3D Classic Zinc Finger 343 377 - -
Mupr1595g00002 647 MobiDBLite consensus disorder prediction 580 647 - -
Mupr1595g00002 647 MobiDBLite consensus disorder prediction 587 614 - -
Mupr1595g00002 647 SMART c2h2final6 411 435 IPR013087 -
Mupr1595g00002 647 SMART c2h2final6 165 189 IPR013087 -
Mupr1595g00002 647 SMART c2h2final6 379 403 IPR013087 -
Mupr1595g00002 647 SMART c2h2final6 443 467 IPR013087 -
Mupr1595g00002 647 SMART c2h2final6 347 371 IPR013087 -
Mupr1595g00002 647 PANTHER OS06G0651300 PROTEIN-RELATED 379 407 - -
Mupr1595g00002 647 SUPERFAMILY beta-beta-alpha zinc fingers 440 473 IPR036236 -
Mupr1595g00002 647 SUPERFAMILY beta-beta-alpha zinc fingers 411 439 IPR036236 -
Mupr1595g00002 647 SUPERFAMILY Ribonuclease H-like 240 322 IPR012337 -
Mupr1595g00002 647 SUPERFAMILY beta-beta-alpha zinc fingers 374 408 IPR036236 -
Mupr1595g00002 647 SMART ZnF_U1_5 440 474 IPR003604 GO:0003676|GO:0008270
Mupr1595g00002 647 SMART ZnF_U1_5 344 378 IPR003604 GO:0003676|GO:0008270
Mupr1595g00002 647 SMART ZnF_U1_5 411 439 IPR003604 GO:0003676|GO:0008270
Mupr1595g00002 647 SMART ZnF_U1_5 379 410 IPR003604 GO:0003676|GO:0008270
Mupr1595g00002 647 SMART ZnF_U1_5 162 196 IPR003604 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1595g00002 Mupr-Chr1595 19798 36298 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1595g00002 333 440 C2H2 Transcription Factor Family AT5G61190 23.295 1.03e-08 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr1595g00002 RuvX 1.7e-14 CL0580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1595g00002 - - gmx:100794880 322.013