Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15941g00001 ATGTTCCAGCCGAACCTTATGGACGCGTTGGAGATGGGTCAGAACACTTCGGAGAGTGAGGTTCCTCGAATCCGTGAAGATGAGTTCGACAGTGCCACCAAGTCTGGTAGTGAAAATCATGAAGGTGCCTCTGGTGAAGACCAAGACCCTCGTCCAAACAAAAAGAAGCGTTACCACCGCCACACCCAACACCAGATCCAGGAAATGGAAGCTTTCTTCAAGGAGTGTCCTCACCCAGATGACAAGCAAAGGAAGGAACTGAGCAGGGAGTTAGGGTTAGAGCCGTTGCAGGTTAAGTTTTGGTTTCAGAACAAGCGTACTCAGATGAAGACACAACACGAGCGGCACGAGAATACACAGCTTAGAACCGAAAACGAGAAGCTTAGAGCAGATAACATGAGGTATAGAGAAGCTCTTAGCAATGCTTCGTGTCCTAATTGTGGTGGACCAACCGCTATAGGAGAAATGTCATTCGATGAACATCACTTGAGGCTTGAAAACGCACGGCTACGAGAAGAGATTGATCGAATTTCAGCAATTGCTGCCAAGTATGTAGGGAAGCCTGTGGTAAACTATTCAAATATTTCTCCTTCTCTTCCTCCTCGTCCACTTGAACTTGGGGTTGGTGCTGGTTTTGGAGGCCAGCCCGGGATTGGTGTGGACATGTACGGAGCTGGGGATCTTCTGAGGTCAATTAGTGGGCCCACTGAAGCAGATAAACCAATAATAATAGAGCTAGCTGTTGCTGCTATGGAGGAGCTAGTTGGGATGGCACAAGTGGGTGAACCTCTTTGGTTAACTACCCTTGATGGCACATCCACTATGCTCAATGAAGATGAATACATCAGGTCCTTCCCTCGAGGAATTGGCCCAAAACCTACTGGCTTCAAATGTGAAGCTTCTCGAGAAACTTCTGTGGTTATCATGAACCATGTCAGCCTCGTTGAGATTCTCATGGATGTCAACCAATGGTCCACAGTGTTCTCTGGTATAGTCTCAAGAGCCATGACTCTTGAAGTGCTATCAACGGGGGTGGCCGGGAACTACAATGGTGCCTTACAAGTGATGACAGCAGAACTACAACTACCTACACCTCTTGTGCCAACTCGTGAGAGTTATTTTGTAAGGTATTGTAAGCAACATTCGGATGGGACTTGGGCAGTTGTGGATGTGTCTTTGGATAATTTGCGTCCTAGTCCTTCAGCTAGATGTAGAAGAAGGCCTTCTGGTTGCTTAATTCAAGAAATGCCAAATGGCTATTCAAAGGTGACATGGGTTGAGCATGTGGAAGTGGATGATAGAGGTGTTCATAATCTTTACAAGCAGCTTGTTAGCTCTGGACATGCATTTGGCGCAAAACGTTGGGTTGCAACCTTAGATCGACAATGTGAAAGGCTCGCTAGTGCCATGGCAACAAACATTCCCACCGTAGATGTTGGCGTGATAACAAACCAAGAAGGGAGAAAGAGCATGATGAAGCTGGCAGAAAGAATGGTTATAAGCTTTTGCGCGGGAGTGAGTGCTTCCACTGCTCACACATGGACAACACTCTCTGGGACAGGAGCTGATGATGTAAGGGTGATGACCCGAAAGAGTGTGGATGACCCTGGAAGACCCCCTGGCATCGTTCTCAGTGCTGCCACTTCTTTTTGGCTTCCAGTTCCACCTAAACGAGTCTTTGACTTCCTCCGTGACGAGAACTCTAGAAATGAGTGGGATATTCTTTCCAACGGTGGAGTTGTCCAAGAAATGGCACACATTGCAAATGGACGAGACACTGGAAACTGCGTGTCTCTACTTCGAGTAAATAGTGCAAATTCTAGCCAGAGCAACATGTTGATATTGCAAGAGAGTTGCACCGATTCAACCGGTTCTTTTGTGATTTACGCTCCGGTTGATATTGTAGCCATGAATGTAGTTCTAAATGGAGGAGACCCAGACTATGTTGCCCTTCTTCCTTCAGGGTTTGCTATTCTCCCAGATGGGACCACAACGCATGGAAGTGCCATTGGCGAAACTGGGCCAGGTGGCTCTCTTTTAACTGTTGCGTTTCAAATACTGGTTGATTCGGTTCCAACGGCTAAGCTTTCTCTCGGATCTGTTGCCACTGTTAACAATCTCATTGCATGCACTGTGGATAGAATCAAGGCTTCTTTAACCGTTCATGTAAGTGATGATGATACGTGGACCCTTAAGAAGTACTTTATTACAAGGTAG 2217 0.4673 MFQPNLMDALEMGQNTSESEVPRIREDEFDSATKSGSENHEGASGEDQDPRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYSNISPSLPPRPLELGVGAGFGGQPGIGVDMYGAGDLLRSISGPTEADKPIIIELAVAAMEELVGMAQVGEPLWLTTLDGTSTMLNEDEYIRSFPRGIGPKPTGFKCEASRETSVVIMNHVSLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAELQLPTPLVPTRESYFVRYCKQHSDGTWAVVDVSLDNLRPSPSARCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWVATLDRQCERLASAMATNIPTVDVGVITNQEGRKSMMKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENSRNEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDSTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTTTHGSAIGETGPGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVDRIKASLTVHVSDDDTWTLKKYFITR 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15941g00001 738 Gene3D - 291 462 IPR023393 -
Mupr15941g00001 738 SMART HOX_1 53 116 IPR001356 GO:0003677
Mupr15941g00001 738 MobiDBLite consensus disorder prediction 20 53 - -
Mupr15941g00001 738 CDD START_ArGLABRA2_like 240 464 - -
Mupr15941g00001 738 ProSiteProfiles 'Homeobox' domain profile. 52 112 IPR001356 GO:0003677
Mupr15941g00001 738 SMART START_1 245 465 IPR002913 GO:0008289
Mupr15941g00001 738 SUPERFAMILY Bet v1-like 484 716 - -
Mupr15941g00001 738 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 53 719 IPR042160 -
Mupr15941g00001 738 Pfam START domain 246 465 IPR002913 GO:0008289
Mupr15941g00001 738 SUPERFAMILY Homeodomain-like 44 112 IPR009057 -
Mupr15941g00001 738 FunFam Homeobox-leucine zipper protein GLABRA 2 245 464 - -
Mupr15941g00001 738 CDD homeodomain 55 113 IPR001356 GO:0003677
Mupr15941g00001 738 SUPERFAMILY Bet v1-like 236 467 - -
Mupr15941g00001 738 Pfam Homeodomain 55 110 IPR001356 GO:0003677
Mupr15941g00001 738 MobiDBLite consensus disorder prediction 1 63 - -
Mupr15941g00001 738 FunFam Homeobox-leucine zipper protein HDG1 42 128 - -
Mupr15941g00001 738 ProSiteProfiles START domain profile. 236 468 IPR002913 GO:0008289
Mupr15941g00001 738 Gene3D - 41 129 - -
Mupr15941g00001 738 ProSitePatterns 'Homeobox' domain signature. 87 110 IPR017970 GO:0000981|GO:0006355
Mupr15941g00001 738 Coils Coil 118 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15941g00001 Mupr-Chr15941 3666 8879 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15941g00001 1 724 Homeobox Transcription Factor Family AT1G05230 77.717 0.0 1169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr15941g00001 START 4.9e-60 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15941g00001 K09338 - gmx:100782260 1399.8