Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15921g00003 ATGGAGATGCAACAGCTCCTGAGCATGGGCTTCCCGGACGAGTTAGCGGCCCAAGCCTTGGCTGCGACCGGCGGCAAATCCACCGTGAAAGCCACAGAATGGATTCTGACTCACAAATCCAACTCTAACCCATCCACTTCCGCATTTCAGCCCAAGCTGGATCGTTTCTTCCAATCTCAATCCCAATCCACCATCACCCCTCCGCATTCACAACAAGAAGAACAAGAGGAACCCTCCAAACGCCTCAAGCCTTCTTCTCATTCTCAACAACAAAACTGGCCCTCCTTCTTCTTCAAGAAACACGCCAACAACAACAACAATAACGCGCACATTCACGAACCCTTGTACGAGCGGTTGCGTCCCAGAACCCTGGACGAGGTGGTCGGTCAGGAGCATCTCCTCGCCACCAACTCCCTCCTTCGCTCGGCAATCCAACGCAATCGACTCCCTTCCGTCCTCTTGTGGGGTCCACCCGGCACCGGTAAGACCACTATCGCCAAAGCCATCGTGAATTCCGCAACCCCCACCTGTTACCGCTTTGTCTCCTTATCTGCCGTCACTAGCGGCGTTAAAGACGTGAGGGACGCCGTTGACGAGGCCAGAAAAGTCAGACTTAAATCCAACCAAACCACCGTTCTGTTCGTGGACGAGGTTCACCGGTTCAACAAGTCCCAACAGGACTCTTTCTTACCCGTTATTGAAGATGGCAGCATTGTCTTCGTTGGGGCCACCACCGAGAACCCTTCTTTCCATTTGATCACGCCTCTCTTGTCTCGCTGCCGTGTCCTCACCTTAAACCCTCTCCAGCCCCACCATCTTGCCTTGCTTCTGAATCGTGCTGCCTGTGACCCCGACAAAGGCTTGATGCAAAGCGTGGGGGTTCAAGTTGATGTTAGCGAGGATGTTGTTCATTTTATTAGCAATAACTCTGATGGGGATGCTCGGGTGGCCTTGAACGCCTTGGAGATTGCAGCTGTTACTGCAGCTGCGCGGCTACAACACAAGGAAGAAAACGAGGAATACAAGGTTGTTGCTGCTGTTGTTATGGTTGATGATGCAAAGGAGGCACTTCAGTGCAAGCACCTTGCTTATGATAAAGCTGGGGAAGAGCACTATAATCTAATCAGTGCGTTGCACAAGTCTATGAGGGGAAGCGATGCGGATGCGGCCATTTATTGGTTGGCAAGAATGTTAGAGGGAGGTGAAGAGCCTCTTTACATTGCACGCAGACTCATACGCTTTGCAAGCGAGGATGTTGGTTTGGCTGATCCCTCCGCTCTTACTCAGGCCGTTTCATGCTACCAAGCTTGCCATTTCTTGGGAATGCCCGAGTGTAACGTCATTCTTGCACAGTGTGCTGCTTACTTGGCCTTAGCACCTAAATCTGTTGCAGTCTATCGAGCAATAGGAGCCGCTCAGAAGGCTGTCAGGGAATCGGCTGCACTCAATGACGGGGTGCCTCTCCATTTGAGGAATGCACCAACCAAATTAATGAAGGAAATTGGGTATGGGAAGGGATACATATACCCTCCCGACAACCCCTCCTCAACACAAACTTACTTGCCACCATCACTTCAAGGCCACAAGTTCCTCGATTGGCCCGACAGGATTCCCTCTGATGGATAA 1626 0.5166 MEMQQLLSMGFPDELAAQALAATGGKSTVKATEWILTHKSNSNPSTSAFQPKLDRFFQSQSQSTITPPHSQQEEQEEPSKRLKPSSHSQQQNWPSFFFKKHANNNNNNAHIHEPLYERLRPRTLDEVVGQEHLLATNSLLRSAIQRNRLPSVLLWGPPGTGKTTIAKAIVNSATPTCYRFVSLSAVTSGVKDVRDAVDEARKVRLKSNQTTVLFVDEVHRFNKSQQDSFLPVIEDGSIVFVGATTENPSFHLITPLLSRCRVLTLNPLQPHHLALLLNRAACDPDKGLMQSVGVQVDVSEDVVHFISNNSDGDARVALNALEIAAVTAAARLQHKEENEEYKVVAAVVMVDDAKEALQCKHLAYDKAGEEHYNLISALHKSMRGSDADAAIYWLARMLEGGEEPLYIARRLIRFASEDVGLADPSALTQAVSCYQACHFLGMPECNVILAQCAAYLALAPKSVAVYRAIGAAQKAVRESAALNDGVPLHLRNAPTKLMKEIGYGKGYIYPPDNPSSTQTYLPPSLQGHKFLDWPDRIPSDG 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15921g00003 541 FunFam AAA-type ATPase family protein 268 343 - -
Mupr15921g00003 541 Gene3D - 358 461 - -
Mupr15921g00003 541 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 340 IPR027417 -
Mupr15921g00003 541 SMART AAA_5 148 268 IPR003593 GO:0016887
Mupr15921g00003 541 SUPERFAMILY post-AAA+ oligomerization domain-like 368 534 IPR008921 GO:0003677|GO:0006260
Mupr15921g00003 541 CDD HLD_clamp_RarA 268 329 - -
Mupr15921g00003 541 CDD AAA 128 261 - -
Mupr15921g00003 541 Gene3D - 268 343 - -
Mupr15921g00003 541 Pfam AAA C-terminal domain 295 383 IPR032423 -
Mupr15921g00003 541 PANTHER WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER 1 536 - -
Mupr15921g00003 541 MobiDBLite consensus disorder prediction 59 90 - -
Mupr15921g00003 541 FunFam Putative AAA family ATPase 358 461 - -
Mupr15921g00003 541 Gene3D - 101 266 IPR027417 -
Mupr15921g00003 541 Gene3D - 462 537 - -
Mupr15921g00003 541 FunFam Replication-associated recombination protein A 104 267 - -
Mupr15921g00003 541 Pfam MgsA AAA+ ATPase C terminal 384 532 IPR021886 -
Mupr15921g00003 541 Pfam ATPase family associated with various cellular activities (AAA) 152 262 IPR003959 GO:0005524|GO:0016887
Mupr15921g00003 541 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 1 38 IPR015940 -
Mupr15921g00003 541 SUPERFAMILY UBA-like 3 43 IPR009060 GO:0005515
Mupr15921g00003 541 Pfam UBA/TS-N domain 4 35 IPR015940 -
Mupr15921g00003 541 Gene3D - 2 50 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15921g00003 114 322 Core DNA Replication Machinery Family AT1G77470 27.442 1.04e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15921g00003 K07478 - gmx:100799257 847.425