Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15904g00001 ATGTCCTCTGAAGACCACTCCTACTTTGTTCAGTGGCACTTTCATAAGCTAAACAGTTCAACCTTTTTTCACTCCAATAGCCAAAGCCTATACCTATTACTATGGTTTTTTGCCATTCTCGTTTTTGTTCCTTCTCTCTTCTTGTGCATCAATTTTTGTCCGGCCGTAGATTCTCACAGCAAGAAAGCTCCACTGCAACTACAGTGGTCCCTCCTCTACCTGATTGTGAATGGATGGGAATTAAGTTCACAAACCACAGTATGGTCTCATCTTCAACTAGCATGGTTGGTGCAGATTTTGAGAAGGAGGAATATGTTAAGAGAGTGTGAACATGTCTTTCATTCTGAGTGCTTGGACATGTGGCTTAGTGCACACCCTAGCTGCCCTCTCTGCAGGGCCTCACTCCATCACAGTCAAAATCTCAAAAAATAA 432 0.4282 MSSEDHSYFVQWHFHKLNSSTFFHSNSQSLYLLLWFFAILVFVPSLFLCINFCPAVDSHSKKAPLQLQWSLLYLIVNGWELSSQTTVWSHLQLAWLVQILRRRNMLRECEHVFHSECLDMWLSAHPSCPLCRASLHHSQNLKK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15904g00001 143 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 96 143 IPR013083 -
Mupr15904g00001 143 ProSiteProfiles Zinc finger RING-type profile. 108 132 IPR001841 -
Mupr15904g00001 143 Pfam Ring finger domain 102 132 IPR001841 -
Mupr15904g00001 143 SUPERFAMILY RING/U-box 106 138 - -
Mupr15904g00001 143 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 105 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15904g00001 Mupr-Chr15904 2125 3318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15904g00001 105 135 Rapid Response to Elicitors AT3G05200 58.065 2.68e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15904g00001 - K10664 gmx:102667569 139.043