Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15899g00004 ATGCCCAACACCTTCTCCTCTCTCCTTAGGTGGACCGGTGAAAAGTTGCGACGAAGGAATACAGTTAGCAATGGAGATAGTGGGAGCGACAACAACAACAACCACGTAAGCGCACCAATTGTGGATGAAAATCCATTTGGCGGTGGAGTGGAGTGTTATGCATGCACGCAGGTAGGCGTGCCGGTGTTCCACTCCACCAGCTGCGACAGCGTCCACCAGCCGCAGTGGGAGGCTTCGGCGGGATCCTCCCTAGTTCCGATCCAAAACAGGCCCAATAAGGTTTCGGGCTCGCGGGGCGTGTCCCGTTCGAATTCGGGACCATTTGGGCGGGTTCTAGATCCGCGCAGCAAGCGTGTGCAAAGGTGGAATCGCGCTCTGCTGCTGGCGCGTGGGGTGGCGTTGGCTATAGACCCGCTGTTCTTCTACGCTCTGTCCATCGGGAGAGAGGGGTCGCCGTGCCTCTACATGGACGGTGGGCTGGCTGCGATGGTTACGGTGGCGCGGACGTGCGTGGACGCCGTGCACCTTTTCCACGTGTGGCTGCAGTTCAGGCTCGCGTACGTGTCGCGCGAGTCGCTCGTGGTGGGGTGTGGGAAACTTGTGTGGGACGCGCGTGCCATCGCGTCGCATTACCTGCGATCCTTCAAGGGGTTCTGGTTCGATGCCTTCGTGATCCTCCCCGTTCCCCAGGTCAGGATTTTTCGTAACTTGCTTCTTTCTTCGCTCTATCCCACGCTGCAAAGTACAAGCACTCACTCACACGCTGTGTTTTGGTTAATAGTGCCAAAATTGATAAGAGAAGAGCGAATTAAAATCATTATGACCATAATGCTATTGATTTTTTTGTTCCAATTTCTCCCTAAGGTTTACCATAGCATCTGCATGATGAGAAGAATGCAAAAAGTCACTGGCTACATCTTTGGCACCATTTGGTGGGGCTTTGGCCTCAATCTCATAGCTTACTTTATTGCTTCTCATGTTGCTGGAGGGTGCTGGTATGTCCTTGCGATTCAACGCGTTGCGTCGTGCCTCCGGCAGCAGTGTGAAAGAAATGGATGCAATCTTTCTGTATCATGCTCAGATGAGGTATGCTACCAGTCTTTGTTACCAGCAGGCACAATAGGAGATTCATGTGGTGGAAACTCAACAGTGGTGAAGCCTTTGTGCTTAGATATTGAAGGACCTTTCAAATATGGGATCTACCAATGGGCACTTCCAGTCATATCCAGCAACTCTTTGGCTGTTAAGATTCTTTATCCCATTTTTTGGGGTTTGATGACCCTCAGCACTTTTGGAAATGATCTTGAACCGACAAGTAACTGGCTAGAAGTGATTTTCAGCATATGCATCGTACTCAGTGGACTATTGCTTTTCACATTGTTGATTGGTAACATTCAGGTATTCTTACATGCAGTCATGGCAAAGAAGAGAAAGATGCAGCTGAGATGTCGTGACATGGAATGGTGGATGAGGAGGAGGCAGTTGCCATCACGATTAAGACAAAGAGTTCGCCATTATGAACGTCAGAGATGGGCTGCCATGGGAGGAGAAGATGAGATGGAAATGATCAAAGACTTGCCTGAAGGGCTGAGGAGGGACATCAAGCGCCATCTCTGCCTCGACCTCATTAGAAAGGTTCCTCTATTCCACAACTTGGATGATCTTATTCTTGACAACATCTGTGACAGGGTGAAGCCTCTAGTCTTCTCTAAAGATGAAAAGATAATTAGAGAAGGTGATCCTGTACCAAGGATGGTGTTCATAGTCCGGGGCCGCATAAAGCGCAATCAAAGTCTAAGCAAAGGCATGGTGGCCTCAAGCATCCTTGAACCAGGAGGGTTTTTGGGCGACGAGCTACTCTCATGGTGCCTTCGCCGGCCGTTCATTGACCGGCTTCCGGCCTCCTCGGCCACATTTATATGTCTTGAACCAGCAGAAGCTTTTGGCCTTGATGCAGATCATTTGAGGTACATCACTGATCACTTCAGGTACAAATTTGCCAATGAGAGGCTGAAGAGAACAGCAAGATATTACTCATCCAATTGGAGAACTTGGGCCGCTGTCAACATTCAATTTGCTTGGAGACGTTACAGGCAGAGGACTAGAGGTCCAGTGACCCCTGTAAGGGACAATGGAGGCACTGAGCGCAGGCTCTTGCAATATGCTGCAATGTTCATGTCAATAAGGCCACATGACCATCTTGAGTGA 2208 0.4991 MPNTFSSLLRWTGEKLRRRNTVSNGDSGSDNNNNHVSAPIVDENPFGGGVECYACTQVGVPVFHSTSCDSVHQPQWEASAGSSLVPIQNRPNKVSGSRGVSRSNSGPFGRVLDPRSKRVQRWNRALLLARGVALAIDPLFFYALSIGREGSPCLYMDGGLAAMVTVARTCVDAVHLFHVWLQFRLAYVSRESLVVGCGKLVWDARAIASHYLRSFKGFWFDAFVILPVPQVRIFRNLLLSSLYPTLQSTSTHSHAVFWLIVPKLIREERIKIIMTIMLLIFLFQFLPKVYHSICMMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCERNGCNLSVSCSDEVCYQSLLPAGTIGDSCGGNSTVVKPLCLDIEGPFKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHYERQRWAAMGGEDEMEMIKDLPEGLRRDIKRHLCLDLIRKVPLFHNLDDLILDNICDRVKPLVFSKDEKIIREGDPVPRMVFIVRGRIKRNQSLSKGMVASSILEPGGFLGDELLSWCLRRPFIDRLPASSATFICLEPAEAFGLDADHLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRQRTRGPVTPVRDNGGTERRLLQYAAMFMSIRPHDHLE 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15899g00004 735 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 103 701 - -
Mupr15899g00004 735 SMART cnmp_10 548 674 IPR000595 -
Mupr15899g00004 735 SUPERFAMILY cAMP-binding domain-like 475 662 IPR018490 -
Mupr15899g00004 735 ProSiteProfiles cAMP/cGMP binding motif profile. 548 658 IPR000595 -
Mupr15899g00004 735 MobiDBLite consensus disorder prediction 22 38 - -
Mupr15899g00004 735 MobiDBLite consensus disorder prediction 86 112 - -
Mupr15899g00004 735 CDD CAP_ED 548 658 IPR000595 -
Mupr15899g00004 735 Gene3D Helix hairpin bin 474 539 - -
Mupr15899g00004 735 Gene3D Jelly Rolls 546 664 IPR014710 -
Mupr15899g00004 735 MobiDBLite consensus disorder prediction 86 104 - -
Mupr15899g00004 735 SUPERFAMILY Voltage-gated potassium channels 113 469 - -
Mupr15899g00004 735 MobiDBLite consensus disorder prediction 18 38 - -
Mupr15899g00004 735 Pfam Ion transport protein 122 466 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15899g00004 Mupr-Chr15899 10829 16863 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15899g00004 9 735 Ion Channels AT5G15410 74.094 0.0 1046
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15899g00004 K05391 - gmx:100798823 1276.54