LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr15899g00003	ATGGGGGAAGAACAGAACAGAACAGGACAAAACAAAACAGAGCCTTTCCTATGTTTTCGGTTGTGTTGTGTCCAAATTTGGAGATATTGTGATGAAGTACCTTGTCAGCAGTGTGGAACCTGGCATATCAACCTAATGGGGTTGAAATTTACAAAGCAGAGTCCACCACCCAAGGTTGATGACCCAAGTTTACATCATCAAATGATCAATATCCTCACCAAGAATTTTATTCGTAACTTGGTATCTAAGCAACGAAGGAGAATGCTTATAGCGGGCTATGATCTTGACATGTCATATATCACAGATCGAGTATTAGCAATGTCATTTCCTGCACAACGTATGCGAGCAATGTATCGAAATCCTCTCTGGCAGGTCAAATCTGTGTTGGACATGAGACATTGTGAGCATTATAAGGTGCACCTTCAACCCATGGCCATGTATAGTGCATATTATCTTCTTATCTACAATCTCTGTATAGAAGAAAGTTATGATCCAGCTAACTTCGATGGACGCGTGGAAGCATACCCCTTCGATGATAACCATGTGCCATCTCTTGAAATGGTGAAAGCTTTCTGTGAAAGTGTGGATTCATGGCTGTCATCTGACCCAAAAAACATTGCTGTTATTCATTGCATGGCTGGAAAAGGTAGAACTGGATTAATGGTGTGCTCATACCTAACTTATTGCGGCATGTCAGCAGATGAGGCTCTACAGTTGTATGCAGATAGACGGACAACCAATAATGAAGGAGTATCAATACCAAGCCAACGTCGTTACGTGACATACTGGGAAAGTCTGCTTTCTAATTCTGTCCCTAGGGGAACTGGAAATGGACCACCACAGGTGAACTTGCCTCAACCATGTAGCAGAGAATTACGGCGAATCCGGCTTTATGATACAGTCAACATTGATGCAATATTCTTTGTTATCTCAGAGCTACAAGAGATTCCTAATGAGGTGTATCGGCCACCAGTGGAAGCTTACCGTGGCTGCTGTAGACAGATTAAGAAAGGGTATCAGAGAAACAACAGTCCTCGCTATTATATCTCTATTCTTGAAGGTGATCAAGATGGAAAGGAATCAGAAACAGAAGAGCCTCGCATTGTAGTTCAAATGGACACAGAGAGTCCTGCCATATACCAAAAGTCCTGTTTGGACCATTATTTTGATAAACCTATACAAGTAACTGGAGATGTACGTGTCATATTCTACGAGAAAATGATAGGGGGTCGCCTTTTCTACTGCTGTTTTAATACAGCTTTTATTAGGAACAGCTTACTACAGCTCACAATACAAGAGTTGGACAAAGTTGGGAAGAGGGGAAGATCAATATGTGGTCCTGCCTTCTGCTTAGAGTTATTGTTTGGTCCAGCTAATACAGGATATTCATCATCAAGTATATCCAATGATGAACATTCAAGTAATGATTCTTTATAA	1437	0.4113	MGEEQNRTGQNKTEPFLCFRLCCVQIWRYCDEVPCQQCGTWHINLMGLKFTKQSPPPKVDDPSLHHQMINILTKNFIRNLVSKQRRRMLIAGYDLDMSYITDRVLAMSFPAQRMRAMYRNPLWQVKSVLDMRHCEHYKVHLQPMAMYSAYYLLIYNLCIEESYDPANFDGRVEAYPFDDNHVPSLEMVKAFCESVDSWLSSDPKNIAVIHCMAGKGRTGLMVCSYLTYCGMSADEALQLYADRRTTNNEGVSIPSQRRYVTYWESLLSNSVPRGTGNGPPQVNLPQPCSRELRRIRLYDTVNIDAIFFVISELQEIPNEVYRPPVEAYRGCCRQIKKGYQRNNSPRYYISILEGDQDGKESETEEPRIVVQMDTESPAIYQKSCLDHYFDKPIQVTGDVRVIFYEKMIGGRLFYCCFNTAFIRNSLLQLTIQELDKVGKRGRSICGPAFCLELLFGPANTGYSSSSISNDEHSSNDSL	478

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr15899g00003	478	PANTHER	PHOSPHATASE WITH HOMOLOGY TO TENSIN	67	468	-	-
	Mupr15899g00003	478	SUPERFAMILY	C2 domain (Calcium/lipid-binding domain, CaLB)	362	457	IPR035892	-
	Mupr15899g00003	478	ProSiteProfiles	Tyrosine specific protein phosphatases domain profile.	189	244	IPR000387	GO:0016311\|GO:0016791
	Mupr15899g00003	478	Pfam	Tyrosine phosphatase family	189	241	IPR026893	GO:0004721
	Mupr15899g00003	478	Gene3D	-	332	460	-	-
	Mupr15899g00003	478	ProSiteProfiles	C2 tensin-type domain profile.	303	458	IPR014020	-
	Mupr15899g00003	478	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	92	270	IPR029021	-
	Mupr15899g00003	478	Gene3D	Protein tyrosine phosphatase superfamily	72	270	IPR029021	-
	Mupr15899g00003	478	ProSiteProfiles	Phosphatase tensin-type domain profile.	86	270	IPR029023	-
	Mupr15899g00003	478	Pfam	C2 domain of PTEN tumour-suppressor protein	371	455	IPR014020	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr15899g00003	Mupr-Chr15899	4428	9746	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr15899g00003	46	458	Protein tyrosine phosphatase (PTP) family	AT5G39400	66.110	0.0	561

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr15899g00003	K01110		-	gmx:100809938	779.245

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