Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15898g00003 ATGCCGGAAAACATGAGCATATCTGTGAATGGCCAATCTCAAGTCCCACCTGGCTTCAGGTTTCACCCCACCGAAGAGGAGCTTCTTCAGTACTACTTGAGGAAGAAGGTCTCTTATGAGAAGATTGACCTCGATGTCATTCGTGACGTTGATCTCAACAAGCTCGAGCCATGGGACATACAAGAGAAATGCAAAATAGGAACAACTCCACAGAATGATTGGTACTTCTTCAGCCACAAAGACAAGAAGTACCCCACAGGAACGCGCACCAATCGCGCCACTGCTGCGGGGTTCTGGAAGGCCACCGGCCGTGACAAAGTTATATACAGCAACGGGAAGAGAATTGGAATGAGAAAGACTCTGGTTTTCTACAAAGGAAGAGCCCCACATGGCCAGAAATCCGATTGGATAATGCATGAATACAGACTAGACGACAACAACACCAGCGACACCAATATCGTGTCGAATGTGATGGGAGATGGTGGTCAGGAAGAAGGGTGGGTGGTGTGCAGGATATTCAAGAAGAAGAACCATCTGAAAACCCTAGACAGCCCGTTAGGTTCGGGGGAAGGTAGAAGGAGCCACTTGTTCGAGTCGTGTGACGAGGGAGCGTTGGAGCAGATACTTCAGCAAATGGGAAGGGGTTGCAAGGAAGAGAGTAGCTACGAGGGGAACTACAACTATGGAAGGTTCGGGAGACCCTATGAGACAGGCCTGAACAATGGCGGCGGGTACAATGACAGGTTCATGAAGCTGCCAAGCCTAGAGAGCCCAAAATCGACGAGCATGGAGAGCCAGCAGAACAACAATAATAATAATGTTGATAACAATGAACATAATAATGGGTATCATCCCATTATTCCAGTAGAGATGGGCACGGACAATGAAGGGTCATTCCCAACCCACCAGGTGAGTGGTGGTGACCCCAACATGGTGGTAGGATCATCATCGTTGATGGTAGGATCAAGTGGTGGAGGCCTCACCAACTGGGCTGCGTTGGACCGATTGGTTGCCTCTCAACTCAATGGCCAAACAGAGGCTTCTAGGCAACTGGCATGCTTCAATGACCCCACCATGGGGTATTGCACCAGCGACCATGATCTGCAATTGCCCACCCTCCGATCTTCATCAACGCCTTCATCAACGTCAACACACACCAGGCCTTCTGCTGCACCCGCATACATCAATCCCACACACGACTACACCAGCGAGATTGACCTTTGGAACTTTACTCGCTCCACCTCCTCCTTGTTGTCATCCTCCGAACCACTCTGCCACGTGTCCAACACGTCAGTCTAG 1299 0.5019 MPENMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSNGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNNTSDTNIVSNVMGDGGQEEGWVVCRIFKKKNHLKTLDSPLGSGEGRRSHLFESCDEGALEQILQQMGRGCKEESSYEGNYNYGRFGRPYETGLNNGGGYNDRFMKLPSLESPKSTSMESQQNNNNNNVDNNEHNNGYHPIIPVEMGTDNEGSFPTHQVSGGDPNMVVGSSSLMVGSSGGGLTNWAALDRLVASQLNGQTEASRQLACFNDPTMGYCTSDHDLQLPTLRSSSTPSSTSTHTRPSAAPAYINPTHDYTSEIDLWNFTRSTSSLLSSSEPLCHVSNTSV 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15898g00003 432 ProSiteProfiles NAC domain profile. 15 175 IPR003441 GO:0003677|GO:0006355
Mupr15898g00003 432 MobiDBLite consensus disorder prediction 255 279 - -
Mupr15898g00003 432 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 269 - -
Mupr15898g00003 432 MobiDBLite consensus disorder prediction 242 279 - -
Mupr15898g00003 432 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Mupr15898g00003 432 Gene3D NAC domain 24 180 IPR036093 GO:0003677|GO:0006355
Mupr15898g00003 432 MobiDBLite consensus disorder prediction 372 396 - -
Mupr15898g00003 432 MobiDBLite consensus disorder prediction 372 391 - -
Mupr15898g00003 432 SUPERFAMILY NAC domain 9 175 IPR036093 GO:0003677|GO:0006355
Mupr15898g00003 432 FunFam NAC domain-containing protein 24 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15898g00003 Mupr-Chr15898 9136 11263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15898g00003 1 431 NAC Transcription Factor Family AT2G46770 54.422 1.58e-139 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr15898g00003 NAM 4.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15898g00003 - - gmx:100793308 705.671