Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15871g00001 ATGCACCTTGCTCACCATATGCTATGCCTTGCATTAACATTGATTCTATTACTATTACATGGAAATGGATCATCATCCAGACATGATGATGTCGTTAAAATCGGTGCCATATTCACGTTAAAAACTAATATAGGACGAGTTTCCAAAATTGCCATCGAAGCTGCTGAGAAAGACGTGAATTCCGATCCTCGCATCCTGGGGGGACGTAAATTGTCCATAACTATTCATGATTCCAACTTCAGTGGTTTTCTTGGGTTTTTTGGGGCCCTCAAGTTGTTGATGAGCGACACAGTAGCTATAATTGGTCCACAAACATCAGTAGTGGCCCATGTGCTTTCTCATCTTGCAAACGAGCTCCATGTTCCCCTACTCTCCTTCACGGCTCTAGATGCCACCCTAACACCTCTCCAGTATCCTTATTTTCTCCAAACTGCACCCAACGATCAGTTCCAGATGACTGCAGTTGCCGACATAATTAGTTATTTTGGTTGGAGAGAAGTCATAGCAGTATTCAGCGATGATGATCAGAGTCGAAATGGGATAACTGTTTTGGCTGATAAACTTGCAGAGCGACGCTGTAAGTTGTCTTACAAAGCTGCACTGCCCCCTGATCCAACCGCCACTCCATCTGATGTTACTAGTCAGTTATTCAAGATTAAGAGTATGGAACCGCGAATAATCGTTTTACACACCCTCGTGCAAACAGGTCTCATGGTTTTTGACGTGGCTCAACAACTAGGTATGACCACCCAAGGCTATGTCTGGATAGCTACTACTTGGTTATCAACTGTTTTGGATTCAACTTCTCCTTCAAATACTTCCAACTCCATTCAAGGTGTTCTTGCTCTTCGCCCTCACACCCCTCAATCCGCAATAAAACAGGCATTTATCTCAAGGTGGAAACACTTAAGTAATGGCTCAGTTGGCTTACATCCATTCGGACTCTATGCATATGATTCTGTTTGGATGATTGCTCGGGCACTAAATTTATTTTTTGATCAGAATGGTACCATTTCATTCTCTAACAACACAAATTTAAGTGGTACGAGGGAAGAGACTCTAGATCTTGGTGCTTTAAGAGTTTTTGATGGAGGGAAGCAGCTACTTGATAGCATACTGGGCATTAATATGAGTGGATTGACTGGACCTATTCAATTTGGTTCAGACAGATCTCCTCTTCATCCATCATATGACATTTTTAATGTAATTGGTAGAGGTTACAGGAGTATCGGTTACTGGTCTAATTACTCTGGCCTCTCTGTAATAACCCCTGAGAAACTTCGCTCAAAGCCTGCCAATCGTTCAATTTCAAACCAGCATCTAAACCGTGTCATATGGCCTGGAAATACAACAGAAACGCCTCGTGGATGGGTTTTCCCAAATAATGGGAGGCAACTCAGAATTGGAGTTCCCAACAGAGTCAGTTACCGAGACATGGTCTCACAAATAAATGGCACCAATGAAGTTCAAGGATATTGCATAGATATATTCCTAGCCGCCATAAAACTGCTTCCATATGCAGTTCAATATAAGTTCATTCTCTTTGGAGATGGACACAAGAACCCAAGCTACTCTGATCTTGTCAACATGATTACTTCTGATGTTTTTGATGCTGCTGTAGGTGACATTGCTATTATCACTGAGCGAACAAAGATTGTGGATTTTACTCAACCATATATAGAGTCGGGGCTAGTTGTGGTTGCACCAGTAAAAAGATTAAAGTCAAATGCTTGGGCTTTCTTGCGACCATTTAGTCCAGTGATGTGGGGTGTCACTGCACTTTTTCTCCTTCTCGTTGGAGCAGTGGTGTGGATTCTTGAACATAGAACAAACGATGAGTTTCGGGGGCCGCCAAAGGAACAGATAGTTACAGTTCTTTGGTTTAGTTTATCAACCATGTTCTTTGCGCATAGAGAAAACACAGTTAGTCCACTTGGTCGAGTTGTGTTGATAATCTGGCTATTTGTGGTTCTGATAATAAATTCAAGTTACACTGCAAGCTTGACATCAATTCTCACTGTGGAGCAGCTATCGTCACCCATAACAGGAATTAATAGCTTGATGTCGAGCAGTTTACGCATAGGGTTCCAAGTAGGGTCATTTGCTGAAAACTATCTGAGTGAGGAACTCAACATCCCCAAACACAGACTTGTTCCTCTTGGCTCACCACAAGAATATGCTGTTGCCCTTGAAAGAGGAACTGTTGCAGCTGTGGTTGATGAACGACCCTATGTAGAACTCTTCCTTTCAAACCACTGCCAATTCTCGATTAGGGGCCAAGAGTTCACCAAAAGTGGATGGGGATTTGCATTCCCCAGGGACTCTCCTATTGCAATGGATATGTCAACTGCTATTCTGACTCTATCCGAGAATGGTGAACTTCAGAGGATCCATCAAAAGTGGCTTTCAGAAAAAGCTAGTGGTTTTCGTGAGGATGAGCACCTTCAATTAAATAGCTTCTCCGGCCTCTTTCTAATATGTGGGATAACATGTTTCGTGGCGCTTTTCATATACTTTTGTTCAATGCTACACCAATTCAGTAAAAAAGATCATTGCACCTCACCTTCTGCACGCATCCAGACATTCCTAACTTTTGTTGACCAAAAACAAGATGTATCACACAAGTTAAAAAGAAAAGTTGAAGACATTTCATCCAATGCTTGTACACAAAATCGTTTCAGAAGCATATCCAACAGAATACAA 2703 0.4199 MHLAHHMLCLALTLILLLLHGNGSSSRHDDVVKIGAIFTLKTNIGRVSKIAIEAAEKDVNSDPRILGGRKLSITIHDSNFSGFLGFFGALKLLMSDTVAIIGPQTSVVAHVLSHLANELHVPLLSFTALDATLTPLQYPYFLQTAPNDQFQMTAVADIISYFGWREVIAVFSDDDQSRNGITVLADKLAERRCKLSYKAALPPDPTATPSDVTSQLFKIKSMEPRIIVLHTLVQTGLMVFDVAQQLGMTTQGYVWIATTWLSTVLDSTSPSNTSNSIQGVLALRPHTPQSAIKQAFISRWKHLSNGSVGLHPFGLYAYDSVWMIARALNLFFDQNGTISFSNNTNLSGTREETLDLGALRVFDGGKQLLDSILGINMSGLTGPIQFGSDRSPLHPSYDIFNVIGRGYRSIGYWSNYSGLSVITPEKLRSKPANRSISNQHLNRVIWPGNTTETPRGWVFPNNGRQLRIGVPNRVSYRDMVSQINGTNEVQGYCIDIFLAAIKLLPYAVQYKFILFGDGHKNPSYSDLVNMITSDVFDAAVGDIAIITERTKIVDFTQPYIESGLVVVAPVKRLKSNAWAFLRPFSPVMWGVTALFLLLVGAVVWILEHRTNDEFRGPPKEQIVTVLWFSLSTMFFAHRENTVSPLGRVVLIIWLFVVLIINSSYTASLTSILTVEQLSSPITGINSLMSSSLRIGFQVGSFAENYLSEELNIPKHRLVPLGSPQEYAVALERGTVAAVVDERPYVELFLSNHCQFSIRGQEFTKSGWGFAFPRDSPIAMDMSTAILTLSENGELQRIHQKWLSEKASGFREDEHLQLNSFSGLFLICGITCFVALFIYFCSMLHQFSKKDHCTSPSARIQTFLTFVDQKQDVSHKLKRKVEDISSNACTQNRFRSISNRIQ 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15871g00001 901 CDD GluR_Plant 464 802 - -
Mupr15871g00001 901 CDD PBP1_GABAb_receptor_plant 33 421 IPR044440 -
Mupr15871g00001 901 Gene3D - 468 576 - -
Mupr15871g00001 901 Gene3D - 147 419 - -
Mupr15871g00001 901 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 868 IPR015683 -
Mupr15871g00001 901 FunFam Glutamate receptor 461 577 - -
Mupr15871g00001 901 Pfam Bacterial extracellular solute-binding proteins, family 3 484 803 IPR001638 -
Mupr15871g00001 901 PIRSF IGluLR_plant 2 899 IPR017103 -
Mupr15871g00001 901 Gene3D - 577 709 - -
Mupr15871g00001 901 SMART GluR_14 467 804 IPR001320 GO:0015276|GO:0016020
Mupr15871g00001 901 Pfam Ligand-gated ion channel 804 830 IPR001320 GO:0015276|GO:0016020
Mupr15871g00001 901 SMART AABind_6 465 805 IPR001638 -
Mupr15871g00001 901 SUPERFAMILY Periplasmic binding protein-like II 444 804 - -
Mupr15871g00001 901 Gene3D - 50 394 - -
Mupr15871g00001 901 SUPERFAMILY Periplasmic binding protein-like I 26 458 IPR028082 -
Mupr15871g00001 901 Gene3D - 730 808 - -
Mupr15871g00001 901 Pfam Receptor family ligand binding region 50 403 IPR001828 -
Mupr15871g00001 901 FunFam Glutamate receptor 577 707 - -
Mupr15871g00001 901 FunFam Glutamate receptor 147 303 - -
Mupr15871g00001 901 FunFam Glutamate receptor 703 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15871g00001 Mupr-Chr15871 2270 5400 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15871g00001 23 887 Ion Channels AT2G17260 60.292 0.0 1099
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15871g00001 K05387 - gmx:100793969 1301.19