Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15838g00001 ATGGACCATTCATCTTCTTCTCCCCAACAAACCACCACACCACCTACCAACAACCGCAAAGGCGGCCCCGACAACAACAAGTTCAGATTCCGCGGCGTCAGGCAACGAAGCTGGGGCAAGTGGGTCGCCGAGATCCGTGAGCCCCGCAAGCGAACCCGCAAGTGGCTCGGAACATACGCCACCGCCGAGGACGCCGCCCGCGCCTACGACCGCGCCGCCCTCACCCTCTACGGCTCTAGGGCTCAACTCAACCTCCAACCCTCCGCTAACTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCTTCCCGCAATTCCTCCTCCACGCAAACCCTACGCCCACTGCTCCCCCGCCCTTCCGCCTTCGCTCTCACTTTCTCCGCCGCATCGAGGTTCGTGCCTACTAACAACACGCTACATCATTCTTTGCAAGTGCAACAACATCGATTATTATCCCGGGAATCTGATGCGGGTGCACCAGTTTGGAATCGCACCAGAACCCATCTCGTTGTGAAGAATGATAATGATAATGATAATCTGGCATCGAATCAGAACCAGCAGCACAATTGCATGTACGAAGATGTGAACTCTTTTGGGGTGGGTTCTTCTGTCGGGTCAAACTTGTCATCTTCGTTGACTTTAACCACTGCGCCTGTTGCTTCGGATAATGCTGAGTTGGGTGTGGTGGGACTCGGATCTCCTTTTATTTGGCCATTCTCAACTGAAGAAGACTACACAACAAATATTGATGTATATGAACAATAA 777 0.538 MDHSSSSPQQTTTPPTNNRKGGPDNNKFRFRGVRQRSWGKWVAEIREPRKRTRKWLGTYATAEDAARAYDRAALTLYGSRAQLNLQPSANSSSSSSSSSSSSSSSSSRNSSSTQTLRPLLPRPSAFALTFSAASRFVPTNNTLHHSLQVQQHRLLSRESDAGAPVWNRTRTHLVVKNDNDNDNLASNQNQQHNCMYEDVNSFGVGSSVGSNLSSSLTLTTAPVASDNAELGVVGLGSPFIWPFSTEEDYTTNIDVYEQ 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15838g00001 258 FunFam Ethylene-responsive transcription factor 2 29 87 - -
Mupr15838g00001 258 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Mupr15838g00001 258 MobiDBLite consensus disorder prediction 1 33 - -
Mupr15838g00001 258 CDD AP2 29 86 IPR001471 GO:0003700|GO:0006355
Mupr15838g00001 258 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Mupr15838g00001 258 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Mupr15838g00001 258 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Mupr15838g00001 258 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 8 198 - -
Mupr15838g00001 258 MobiDBLite consensus disorder prediction 86 118 - -
Mupr15838g00001 258 Pfam AP2 domain 29 78 IPR001471 GO:0003700|GO:0006355
Mupr15838g00001 258 MobiDBLite consensus disorder prediction 1 23 - -
Mupr15838g00001 258 SUPERFAMILY DNA-binding domain 30 87 IPR016177 GO:0003677
Mupr15838g00001 258 Gene3D AP2/ERF domain 28 86 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15838g00001 Mupr-Chr15838 6538 7976 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15838g00001 20 252 AP2-EREBP Transcription Factor Family AT2G40220 48.913 9.49e-45 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr15838g00001 AP2 1.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15838g00001 K09286 - qsu:112015561 186.422