Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15835g00002 ATGGAGGAAGACATGATTCTGATAAAAGCACACAAAGAAGTTGGAAACAAGTGGTCGGAGATAGCGAAGAGGTTGTCGGGCAGAACTGAGAACAGCATCAAGAATCACTGGAACGCAACGAAGCGTCGTCAGAACTGCAGGAGGCACACAAAGAAGAAGCAGTCAAGTTATGAAGGGTCAGTGCTCCATGCTTATGTGAAAAGGGCCACTTCTGATGCTGCTCAAGAAGCTTCCAAAGTGCTCAAGAGATCCATCATCAACAAGAGATGCAATTCTGATGGCTTGGCTCTTGTCTTGAGCTGTGATCACTACCCTAATGATCTTGTCTTCAAAAACAATGCTCACTCTCCTGCAATGCCTAAGGATCCCTTCAACAACAAAATCAAGCATAATGCTGCCAACTAG 405 0.4519 MEEDMILIKAHKEVGNKWSEIAKRLSGRTENSIKNHWNATKRRQNCRRHTKKKQSSYEGSVLHAYVKRATSDAAQEASKVLKRSIINKRCNSDGLALVLSCDHYPNDLVFKNNAHSPAMPKDPFNNKIKHNAAN 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15835g00002 134 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 45 IPR017930 -
Mupr15835g00002 134 ProSiteProfiles Myb-like domain profile. 1 41 IPR001005 -
Mupr15835g00002 134 SUPERFAMILY Homeodomain-like 2 48 IPR009057 -
Mupr15835g00002 134 CDD SANT 2 41 IPR001005 -
Mupr15835g00002 134 PANTHER MYB PROTEIN-RELATED 2 65 - -
Mupr15835g00002 134 Pfam Myb-like DNA-binding domain 2 38 IPR001005 -
Mupr15835g00002 134 SMART sant 2 43 IPR001005 -
Mupr15835g00002 134 Gene3D - 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15835g00002 Mupr-Chr15835 7691 8095 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15835g00002 2 78 MYB Transcription Factor Family AT4G18770 57.143 1.29e-21 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr15835g00002 Myb_DNA-binding 3.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15835g00002 K09422 - ccaj:109801641 135.191