Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15832g00001 ATGAAGAATAGTTACCGCAGCTATGGCATAATAAGAGGACAAGGTGACATCAAACAGTTGCGTGCAGGGTCACTCGGGCTAGAAAAGTGTGTGGTGCAAGCAATGGAGGGCAATCACATGATGGATATAATGGAAGAGCAAAAGTTTGAGTTGCCACCAGGATTCAGGTTTCATCCAACAGATGAAGAACTCATCACTCACTACCTCACACAGAAGGTTCTTGACAGGTGCTTCTGTGCAAGGGCCATTGGGGAGGCTGATTTGAACAAGTGTGAGCCATGGGATTTGCCTTGTATGGCCAAAATGGGTGAAAAGGAGTGGTATTTTTTCTGTGTGAGGGACAGAAAATACCCAACTGGTCAAAGGACTAATAGGGCCACTGGGGCTGGCTACTGGAAGGCCACAGGGAAAGACAGAGAGATATACAAGGCAAAGGCACTAATTGGAATGAAGAAAACTCTGGTTTTCTACATAGGAAGAGCTCCAAATGGTGAAAAAACAAACTGGGTCATGCATGAATACAGATTAGAAAATCAACAACATTCTATGCCCAATCTACCCAAAAACCGCATGAAACGTTTGTTCACATGGTTGTTTGTGTTGGTTTCCTTTCAGAATGATTGGGCCATCTGCAGGATTTTTCAGAAGAGTAATTGTGGGAAGAAAATGCACATTTCTGGGTTGGTGAGGTTCTCCTCCATGGGAAAGGACATGCCTTCATTGATGGATTCTTCTGGTCAATACAACAGTGAAGCAAAGGCTGTTTTGGGGGAGTCAACACACTTCTCTGATCCAAATCAAAGTGAGGATCTGAGGACACAAGACGAAAAAAACATAGTTGATAGCTTTGAAACTCTTATGTTGGCACCTTCATATTCTCCAGACCCCTCTGATATTTCCCCTGCCTCATGGACTTTTACCAAACCTGCCCCTGCTATGGCCCACCACCAATCACTCCATCTTGGGAATCCACACTTCTCAGATTATTTCATGGCTCAGGAACAGTCCATGTTGGGGATGTTGATTGAAAACCATGGATCAAGTACTATCCCAAGAACACAGAAAGATCAGGATAAAGACTTTGATGCTGACATGTCCTCTGTCATGTACAACAATGAAATGTTTCAAAGATCATTTGGGAATCAGGAATTTTCACCAGCTTCTGTAGGACATTTGTATGCTAGTGGCCTGTGGGGATTTTAA 1203 0.4356 MKNSYRSYGIIRGQGDIKQLRAGSLGLEKCVVQAMEGNHMMDIMEEQKFELPPGFRFHPTDEELITHYLTQKVLDRCFCARAIGEADLNKCEPWDLPCMAKMGEKEWYFFCVRDRKYPTGQRTNRATGAGYWKATGKDREIYKAKALIGMKKTLVFYIGRAPNGEKTNWVMHEYRLENQQHSMPNLPKNRMKRLFTWLFVLVSFQNDWAICRIFQKSNCGKKMHISGLVRFSSMGKDMPSLMDSSGQYNSEAKAVLGESTHFSDPNQSEDLRTQDEKNIVDSFETLMLAPSYSPDPSDISPASWTFTKPAPAMAHHQSLHLGNPHFSDYFMAQEQSMLGMLIENHGSSTIPRTQKDQDKDFDADMSSVMYNNEMFQRSFGNQEFSPASVGHLYASGLWGF 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15832g00001 400 FunFam NAC domain-containing protein 100-like 60 220 - -
Mupr15832g00001 400 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 48 307 - -
Mupr15832g00001 400 Pfam No apical meristem (NAM) protein 52 176 IPR003441 GO:0003677|GO:0006355
Mupr15832g00001 400 SUPERFAMILY NAC domain 47 216 IPR036093 GO:0003677|GO:0006355
Mupr15832g00001 400 Gene3D NAC domain 60 220 IPR036093 GO:0003677|GO:0006355
Mupr15832g00001 400 ProSiteProfiles NAC domain profile. 51 216 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15832g00001 Mupr-Chr15832 11550 13709 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15832g00001 50 400 NAC Transcription Factor Family AT5G07680 47.458 1.57e-93 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr15832g00001 NAM 1.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15832g00001 - - gmx:100785620 555.058