Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15808g00002 GTTGCATGCAACTATCCCGGTGTGTCAATAGCTTTTCACGTGGACGCAGGGTCCAACGAAGAATATTTTGCAGTGTTGATTGAGTATGAGGATGGGGATGGTGAGGTTGAGAAAGTTGAACTGAAGGAAGCAGGTTCTTCTGCATGGCATTCCATGCAGCGATCGTGGGGTGCAGTTTGGAAACTTAACCAAGGTTCATCGCTTAAAGCACCCTTCTCCATCAGGCTAACCAATAAATCTCGACAGACTGTTGTGGCTAACAACGTCATTCCTGCGTCCTGGAGGCCTGGTCAAACCTATAGATCACTTGTCAATTTT 318 0.4686 VACNYPGVSIAFHVDAGSNEEYFAVLIEYEDGDGEVEKVELKEAGSSAWHSMQRSWGAVWKLNQGSSLKAPFSIRLTNKSRQTVVANNVIPASWRPGQTYRSLVNF 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15808g00002 106 PRINTS Major pollen allergen Lol pI signature 12 27 IPR005795 GO:0005576|GO:0019953
Mupr15808g00002 106 PRINTS Major pollen allergen Lol pI signature 78 95 IPR005795 GO:0005576|GO:0019953
Mupr15808g00002 106 PRINTS Major pollen allergen Lol pI signature 28 43 IPR005795 GO:0005576|GO:0019953
Mupr15808g00002 106 PRINTS Major pollen allergen Lol pI signature 58 75 IPR005795 GO:0005576|GO:0019953
Mupr15808g00002 106 PRINTS Expansin/Lol pI family signature 49 63 IPR007118 GO:0005576
Mupr15808g00002 106 PRINTS Expansin/Lol pI family signature 88 102 IPR007118 GO:0005576
Mupr15808g00002 106 PANTHER EXPANSIN-B3 1 106 - -
Mupr15808g00002 106 SUPERFAMILY PHL pollen allergen 10 102 IPR036749 -
Mupr15808g00002 106 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 21 102 IPR007117 -
Mupr15808g00002 106 Gene3D - 5 106 IPR036749 -
Mupr15808g00002 106 Pfam Expansin C-terminal domain 10 91 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15808g00002 Mupr-Chr15808 8437 8754 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15808g00002 1 106 Expansin Gene Family AT1G65680 56.481 4.25e-37 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15808g00002 - - gmx:100778088 169.474