Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15806g00001 ATGTCATTCACTGGAACTCTCGACAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGACTTGCTAACTCTTGAAGGTATACCTTACCACAAAAACTGCTTCAGATGCAGTCACTGCAAGGGATATTGTTCTGGCGTGGATTTCCAGAATCAGAGGAGAGAAAAATCCCCCTCCCTAAAGTCACCTCTCTACACATATGTTCTGTGTCCACGTCATCTGTCCGTGGTACGGAAAACAGCCGACCGTGCTGGTTCCCCGGCCGACCGTGCAGGTTCTGACCGGCCGACCGTGCAAGTTCCGACTGGCCGGCCGTCTTGGTTATCGACC 330 0.5091 MSFTGTLDKCKACDKTVYVVDLLTLEGIPYHKNCFRCSHCKGYCSGVDFQNQRREKSPSLKSPLYTYVLCPRHLSVVRKTADRAGSPADRAGSDRPTVQVPTGRPSWLST 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15806g00001 110 PANTHER OS06G0237300 PROTEIN 6 42 - -
Mupr15806g00001 110 Pfam LIM domain 10 41 IPR001781 -
Mupr15806g00001 110 ProSiteProfiles LIM domain profile. 8 80 IPR001781 -
Mupr15806g00001 110 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 3 35 - -
Mupr15806g00001 110 Gene3D Cysteine Rich Protein 2 82 - -
Mupr15806g00001 110 MobiDBLite consensus disorder prediction 80 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15806g00001 Mupr-Chr15806 4732 5131 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr15806g00001 LIM 1.4e-05 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15806g00001 - K09377 gmx:100779513 97.0561