Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15785g00002 ATGAGAGTTGAGATGTTTAAGGAAGTTGGTTCTGAAATAATAATAGGTGAGGAGGGGTGGGGTAAAGTGGAATTGCTGTACCCTCTGATTAAACATGCTTTGCATCAATATCTACCAACCCCCACCGCCACATTAACTAACCAATACTTGACATCATTTTCTCTAACCAAAGAGACACCTAAGCTGGACATGCTCGATTCGGTGCTTCTGGCGCTTTTCTTGCCGTGTCTTGGCATGAGCGCCGTTTTCATCGTCTACATGTGCCTTCTTTGGTACGCCACCACTCACCACACCGACCCCGCGCTACCGGCCAAGCCGGTCTCCGATAAAGGCCTCTCACCTTCCCAGCTCGACAAGCTACCAACAATTACCGGAAAAGACCTTCTCCTGGGCACCGAATGCGCCGTCTGCCTCGACGAGATCGAGAGTGACCAACCGGCCAGACTCGTTCCCGGTTGCAACCATGGCTTCCATGTCCATTGTGCCGATACCTGGCTCTCCAAGCACCCGCTTTGTCCACTCTGTAGAGCCAAACTCGACCCTCTGCTTTTTGCTTCCGTCCAAAATCCGTGCTGA 576 0.5174 MRVEMFKEVGSEIIIGEEGWGKVELLYPLIKHALHQYLPTPTATLTNQYLTSFSLTKETPKLDMLDSVLLALFLPCLGMSAVFIVYMCLLWYATTHHTDPALPAKPVSDKGLSPSQLDKLPTITGKDLLLGTECAVCLDEIESDQPARLVPGCNHGFHVHCADTWLSKHPLCPLCRAKLDPLLFASVQNPC 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15785g00002 191 ProSiteProfiles Zinc finger RING-type profile. 134 176 IPR001841 -
Mupr15785g00002 191 SMART ring_2 134 175 IPR001841 -
Mupr15785g00002 191 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 182 IPR013083 -
Mupr15785g00002 191 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 61 188 - -
Mupr15785g00002 191 Pfam Ring finger domain 133 176 IPR001841 -
Mupr15785g00002 191 SUPERFAMILY RING/U-box 120 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15785g00002 Mupr-Chr15785 10314 11129 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15785g00002 64 191 C3H Transcription Factor Family AT5G42200 52.941 2.77e-44 143