LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr1577g00015	ATGAAGAATACTATATGCAATGTCGTAATCTTGTTCAGGAACAGTTTCAAGGTTAATGTTGTGGTGCATGCCAGATCTTTAATTAAGCAAGTGGGTTATTATTTCTCTTTCCACGGAGTTTCCTTGCTCAACTTGAGTTCTTCTGGTGCTGCCCACCTCTATATATATGCTTTATCTCCCTTGGAATTTCTGAAAGTTTCGGCCTTTATCTCCTTGCAACATAGTAAACTAGAGAATAACAAGTGGGTTGGTTTAGATTTCAGCTGCAGCTTTTGCCGCTTGTTTGAAGTCATGGATTGTTCATCGTGGATTAATACTTCCTTGGATCTCAACATTAATCCCCGAATTGTTAATGAACAAGTTCCCAAGGAGGTAGAAAGCAAGCTTTTCTCGTTGGGAATGACCAAATTTAACATGGAGGAAGAGATTGTAGTACATATTTCTTTGATGAGGGGTTTTTGGCTAAGACTGAATGAATGGATGTTGAATTTGGTGGCATTTCAGTCCACTAGTGAGTTGGAGGAGGAGCTGAAGAGGGTGACTGCAGAAAACAAGAAGTTGGCCGAAATGCTCTCGGTGGTGTGTGAGAACTATAACACTTTGCGGAGCCATTTGATGGAATATATGAACAAAAACCGTGAAAAGGAGATCAGTCCAACATCAAAGAAAAGGAAGTCTGAAAGCAGCAACAACAATAGCAATTGTCTGATGGGAACTAACAATGGATCTGAGAGCAGCTCTACTGATGAAGAATCTTGCAAGAAACCGAGGGAAGAAACCATCAAAGCAAAAATTTCAAGACTTTATGTCAGGACCGAACCATCTGATACTACCCTTATTGTGAAAGATGGATACCAATGGAGGAAATATGGGCAAAAGGTGACCAGAGATAACCCTTGTCCTAGAGCATATTTCAAATGCTCTTTTGCTCCAAGCTGCCCTGTCAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCACTTCTGGTGGCTACTTATGAAGGGGAGCACAATCATCCACAGCTTTCCCAAATGGAGGCAACATCAGGTTCTGGCCGTAGTGTGACCCTTGGAGCTTGTTCCCCATCTCTCATCTCTTCCACTCCAACACTTGTTACCCTTGACTTGACAAAATCTAAGGGCAGCAACGCTTCCAAGATCACAAAGCCTAAAGCAGATTCAGCTAAAGTACCGCAGGTTTTGGTGGAACAAATGGCTACTTCTTTGACCACTGATCCTAACTTCAGAGCAGCACTTGTTGCTGCCATCTCGGGAAGATTCTCAATGGCTGCAGCTTATAATATAGTGGCAAGTCCGAAAACTTTGTCACCTCTCCTCAGAAACCGACCTTCCATTCCCTCTTGCAGTCATGTTTCACTGTTGCATTATTCCAGCAGAAGATGCAACGTTGAGGTGAAAGCTAAGAAGAAGAACCCTTGGCTAGACCCATTTGATTATGAGGATGACCCAGACATGGAGTATGGTTCGTTGTATGCAAATGGGATGCAGGAAGAGGATCCAAGGCCACCGGATGACCCGGATAACCCTTATGGATTCTTGAAATTCCCAGCTGGATATGCAGTGGAGGTAGCCTCCCTTGCGTTGAAAGTGAGAGGGGATGTGAGGAGATGCTGCTGTTTGATATCTGGTGGTGTTTATGAGAACCTCTTGTTCTTTCCGGCTATCCAGCTCATGAAGAACAGGTACCCTGGTGTTCAGATTGATGTGGTGGCCTCCGACAGGGGCAAACAGACCTACGAGTTGAACAAGAATGTCCGCTGGGCAAATGCCTATGACCTTGAGGATGATTTTCCAGACCCTGCTGAGTATACTGATATGGTTGGACTTCTAAAGAATAGGTACTATGACATGGTGTTAAGCACCAAATTGGCAGGCCTTGGACATGCTGCATTTTTGTTTATGACAACTGCCCGAGATAGAGTTAGCTATGTCTACCCAAATGTGAATGCTGCAGGAGCCGGATTACTTCTATCTGAAACATTCGTACCCGATGGTCTAAATCTCTCAGATGGAGGATTTAATATGTATCATGAGATGGTTGATTGGCTGGGAAGACCATTTCGAGAAGTTCCAAGACAAGAAGTGCCACCACTTAGGGTAGCAATCTCAAAGAAACTGAAGGAGGTTGTGGAGAAAAAATACGAAAAAGCAGGTGCAAGAAAAGGAAAATATGTTGTAATTCACGGGATAAAATCAGATTCTAAGGCCTCCATGCAGTCTAGTGGTGATCCTGATAGCTTGCTACCCATTGAAGTGTGGGCTGAAATTGCTTACGCTATAAGGGAAGTTACGCCACTTTTTGTCATCCCACATGAAAAGGAAAGGGAAAATGTGGAGGAATTCTTTGGAGAAGATGCCTCTATAGTCTTTATCACCACCCCTGGACAGATGGCTGCTCTCATTAATGACTCAGCTGGAGTCATAGCTACAAATACAGCTGCTGTTCAGCTTGCAAATGCACGCGAGAAACCTTGTATTGCACTATTTAGCTCTGAAGAGAAGGGAAACAAGTTTGTCCCGCAGGCTGAAGAGAAGAAATGCATTATAATATCATCCAAGACAGGAAAGTTGATAGATATTGATGTTGAGGCTGTAAAAAACGCAGTTCAAACATTCAATTTGTCTCCAGCTTTAGTATAG	2661	0.4322	MKNTICNVVILFRNSFKVNVVVHARSLIKQVGYYFSFHGVSLLNLSSSGAAHLYIYALSPLEFLKVSAFISLQHSKLENNKWVGLDFSCSFCRLFEVMDCSSWINTSLDLNINPRIVNEQVPKEVESKLFSLGMTKFNMEEEIVVHISLMRGFWLRLNEWMLNLVAFQSTSELEEELKRVTAENKKLAEMLSVVCENYNTLRSHLMEYMNKNREKEISPTSKKRKSESSNNNSNCLMGTNNGSESSSTDEESCKKPREETIKAKISRLYVRTEPSDTTLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSLLVATYEGEHNHPQLSQMEATSGSGRSVTLGACSPSLISSTPTLVTLDLTKSKGSNASKITKPKADSAKVPQVLVEQMATSLTTDPNFRAALVAAISGRFSMAAAYNIVASPKTLSPLLRNRPSIPSCSHVSLLHYSSRRCNVEVKAKKKNPWLDPFDYEDDPDMEYGSLYANGMQEEDPRPPDDPDNPYGFLKFPAGYAVEVASLALKVRGDVRRCCCLISGGVYENLLFFPAIQLMKNRYPGVQIDVVASDRGKQTYELNKNVRWANAYDLEDDFPDPAEYTDMVGLLKNRYYDMVLSTKLAGLGHAAFLFMTTARDRVSYVYPNVNAAGAGLLLSETFVPDGLNLSDGGFNMYHEMVDWLGRPFREVPRQEVPPLRVAISKKLKEVVEKKYEKAGARKGKYVVIHGIKSDSKASMQSSGDPDSLLPIEVWAEIAYAIREVTPLFVIPHEKERENVEEFFGEDASIVFITTPGQMAALINDSAGVIATNTAAVQLANAREKPCIALFSSEEKGNKFVPQAEEKKCIIISSKTGKLIDIDVEAVKNAVQTFNLSPALV	886

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr1577g00015	886	SMART	WRKY_cls	281	341	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mupr1577g00015	886	FunFam	WRKY transcription factor 40	266	343	-	-
	Mupr1577g00015	886	Coils	Coil	170	190	-	-
	Mupr1577g00015	886	Gene3D	Glycogen Phosphorylase B;	555	678	-	-
	Mupr1577g00015	886	PANTHER	PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 1, CHLOROPLASTIC	435	886	IPR044983	GO:0009507\|GO:0009773\|GO:0010598
	Mupr1577g00015	886	MobiDBLite	consensus disorder prediction	224	247	-	-
	Mupr1577g00015	886	Gene3D	WRKY domain	266	341	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mupr1577g00015	886	SUPERFAMILY	WRKY DNA-binding domain	278	341	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mupr1577g00015	886	MobiDBLite	consensus disorder prediction	210	257	-	-
	Mupr1577g00015	886	Gene3D	Glycogen Phosphorylase B;	716	881	-	-
	Mupr1577g00015	886	ProSiteProfiles	WRKY domain profile.	276	342	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mupr1577g00015	886	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	555	878	-	-
	Mupr1577g00015	886	Pfam	WRKY DNA -binding domain	282	340	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr1577g00015	Mupr-Chr1577	74182	85553	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr1577g00015	170	427	WRKY Transcription Factor Family	AT1G80840	55.882	8.99e-88	280

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Mupr1577g00015		WRKY	1.5e-22	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr1577g00015	-		-	gmx:100803710	785.793