Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15779g00001 ATGGATCCGGCCGCGATGATGAACGGCGCCACCAACACGACGTCGTATCACCTTTCAGAGATCTGGCCGTTTCCGCCGCCGAACGGAGGCGAGTCCGGCGCCGCGCTGGGCCTAAGGATGCCTCAGTTGGGGCCCGGATTCGGCGACTTCGGCCCGGCAAGCATTGGCCACAAGAAGAGGCGCGACGCGGAGGAGGAATCGGCTAAGGGCCTCTCCACCAGCAATGACGTGAGAATGGATCTGGTTCTGTTTGTTTATGATGGAATTGAAGTTTGGGTATTGGGATTTGCGTGGTGCGTGCAGAACGAGGGTGGTGATGGGAAACGGGTGAAGACGACGAGGAACAAGAGTGAGAATGTGAAAGGTGAAGCAGAAGCCAGTTCAGGAAAGCCTGCGGAGCAAGGTGCTAAGCCACCTTCCGAGCCTCCTAAGCAAGACTACATTCATGTCCGAGCCAGAAGGGGTCAAGCTACTGATAGCCACAGTCTTGCCGAAAGAGCTAGACGGGAAAAGATTAGTGAGAGGATGAAAATTCTTCAGGATTTAGTCCCGGGTTGTAATAAGGTTATTGGGAAAGCACTGGTCCTTGATGAGATAATTAATTATATCCAATCGCTTCAGCGGCAAGTAGAGTTTTTGTCAATGAAGCTTGAAGCAGTAAATTCAAGAATGGCCCCCGGAATCGAAGTGTTTCCTCCTAAAGATTTTGATCAGCAAACATTTGATACAACTGGCATGCCATTCGCTTCTCAAGCTACAAGAGAGTATAGCCGAGGTTCATCACCGGAGTGGTTACATATGCAGTCTCTCCATCAGAGCTCTCATAAATCATATACTCAAGGTGTTGTCAAGTCCAATGGACACCTCATTCCCGTTTTCTACAGGATCGTTTCA 894 0.5034 MDPAAMMNGATNTTSYHLSEIWPFPPPNGGESGAALGLRMPQLGPGFGDFGPASIGHKKRRDAEEESAKGLSTSNDVRMDLVLFVYDGIEVWVLGFAWCVQNEGGDGKRVKTTRNKSENVKGEAEASSGKPAEQGAKPPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMAPGIEVFPPKDFDQQTFDTTGMPFASQATREYSRGSSPEWLHMQSLHQSSHKSYTQGVVKSNGHLIPVFYRIVS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15779g00001 298 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 104 268 IPR024097 GO:0006355
Mupr15779g00001 298 CDD bHLH_AtBPE_like 146 231 - -
Mupr15779g00001 298 MobiDBLite consensus disorder prediction 54 71 - -
Mupr15779g00001 298 FunFam Basic helix-loop-helix transcription factor 153 225 - -
Mupr15779g00001 298 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 154 224 IPR036638 GO:0046983
Mupr15779g00001 298 MobiDBLite consensus disorder prediction 105 145 - -
Mupr15779g00001 298 Coils Coil 203 223 - -
Mupr15779g00001 298 MobiDBLite consensus disorder prediction 27 71 - -
Mupr15779g00001 298 Pfam Helix-loop-helix DNA-binding domain 160 207 IPR011598 GO:0046983
Mupr15779g00001 298 MobiDBLite consensus disorder prediction 107 123 - -
Mupr15779g00001 298 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 156 206 IPR011598 GO:0046983
Mupr15779g00001 298 SMART finulus 162 212 IPR011598 GO:0046983
Mupr15779g00001 298 Gene3D - 153 226 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15779g00001 Mupr-Chr15779 3272 6129 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15779g00001 1 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 47.727 5.09e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr15779g00001 HLH 2.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15779g00001 - - gmx:100794893 371.703