Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15773g00002 ATGTCCGTCACCGACTCCGATTCCGCCAGAATGAAGAAGAAACACACAGTGGAAGGGTTCGCTGCGGTGTGGCAGTGGCAGTTTCAGTTCTTCGTTCGGTCGGTGCCGACGGGACGGAGCATGGTGATGACCGGTTTCGCTGAAGAGACGGTGGAATCAGTCCTCCGAAGGATGGAGTGGGAGACGAAGATTCGGATGAGCGAGCTGAGAGTGATATATAACGGAAGACAGCTTCAATTGGAGCAGAGTCTGGAAGAGTGCGGAATCGAGAAGGATTCGATGGTCCACCTGGTCGGCCATTTGCGCAGCGGCGGCTACCCGGAGGCGTGGCGGGCTATCGACTACATGGTCTCCGTCCTGGCGCAAGTGTGCCGCGGCGAACAGGAGACGCTCGCGTCCGAAGGTTTGAGGACCGTGAAGCTTCTCGTCACGTGCCACTTCAGCCTCCCCGGCTTCGCCGAGGTTTTCGCGTCCTCGAAGGCTCCGTCGATGTTGGCATGGCTCTACGCCTGGCCACGTGGAGGCAGCAGAGAGCACGCCGAGGATTGCATAAGCCATTTACTTAGTTGCTGTCGCGCCACCAAAAATTCTCAGTCTGGTTCTGTCGGCGCAGTTTTGGAGCTTTGTAAACAGCTTAGGGAGCTTAAGTGCGAGAGTAACGATGTTTTGTATGTTTCGTGTCGTGACGTTTTGTCGTTTTTGTTGGAGACTGTTGGGGTATCTTATGGTTCTGGGAAAGTTAAACACAGGGTTTCGCTTCGTGATGTTTTCTCCTTTGTTCCTGAGCTCGTGGATAGGTTGTTGATGAGTTTGAATTGTGGTATGAAAGTTGTCGTTGCCTCTACGAAGCCTTTGTTCGGAGAGGTTAAGGATTTTGCAACATTCGTGAGGCCTTTAAGGAGTAGAATGAGCATGGGGCAATGTTTGGGGTTTTTTTCGAGTGATGAAAAATGTAATGTGAAGGGAGATGAGGAGGATCAATTGCTTGCTGAAGAGGTTGATTATCTTCGAGTCGCTTTTGTTCGGTTGTTGAGCAAAATGGATGAGTGTTTACAGCGCATGGGGGAACGCTTGGCTGGCAAGGAAAAACGGGTGACGGGTTTTGTTGTGAGTCATTCATGGTCTGAGTATCTTAATATCTTGAAGGAGTTGTATGGGATTTCTAAGGTCTTTGACGGTGCAGAGGAAATGTTTTGGAGAGTTTTGATGCATCATAGAAGTATGCTATCTGTGCTTATTACTGCTTTTGTGAAGAGAGGTAGAGGTAATGACCATCGGTGGATTCTTGAGAACAAGAGTGTGACCAATTTTGAGTGTAGGAGGCATTTGGCGATGGAGCTGTTCCCTAGTGGGAAAGAGTTCTATGACCTGTTTCATGAGATGCTTATTGATAGGTCTCAGTTACTGGCTCAATCTTTCGAGTACATAGGGCGAGCGAAGCCTGAGTCTCTGCGCTCTGGTCTGTTTATAGAATTCAAAAATGAGGAAGCTACAGGACCGGGTGTGCTGCGGGAGTGGTTTGTTTTGGTGTGTCGCGCAATATTTAATCCGCAAAATACTCTTTTTCTGGCTTGCCCCAATGACTGCAGGAGATTTTATCCCAATCCTGCATCTAGGGTACATCCTCTGCACCTTGAGTACTTCAGGTTCTCTGGTCGTATTATTGCATTGGCTTTGATAAAAAAGGTGCAAGTGGGTATTGTTTTTGATCGCGTGTTTTTCATGCAATTGGCCGGAAACTATGTTACTTTAGAAGATATAAGGGATGCAGATCCTTACTTGTATAGAAGCTGCAAGCAAATTTTGGAGATGGATGCTGATTTCATTGATTCAGATGCATTAGGACTGACATTTGTTAGAGAGGTGGAGGTATTAGGATGCAGGGAAATGGTTGAGCTTTGCCCTGGGGGGAGAAGCCTTGTCATGAATAGTAAGAACAGGGAGAAGTATGTCGATCTTCTTATACAGAACTGTTTTGTATCACATTTTGCCAAGGGTTTTGCTGATATTCTTTCCAACTCAAAGCTCCAACAGTTCTTCCAATGTTTAGAGCTTGAAGATCTTGATTGGATGCTGTATGGGAGTGAAAAACCCATTTCTATTGAAGATTGGAAGGCGCATACCAAGTACAAGGGGTATAAAGAGTCTGATTGTCAGATATCTTGGTTTTGGGAGTGTAGCAAAAAGGGGCCTTATTGCTTCTTGGAAAGCATCGGTGTCTTTGCTACTTATAAAATTGTTGGGAGAATGTCCGCAAAACAAATGAAGGTTCTTCTTTTCTTTTGGACATCAGTGAAATATTTACCAGTTGAAGGATTCCGTGGTTTGGCTTCCAATCTATACATTCATATGGCTCTGGAACCTAAGAATAGCCTGCCCACATCTCACACATGCTTTTACCAACTGTGTTTCCCCCCGTATTCATCTAAGGCTGTCATGCAAGATCGCCTTGGAGTCATCACTCAAGAACACATTGGTTGCAGTTTTGGTTATAGTTAA 2499 0.463 MSVTDSDSARMKKKHTVEGFAAVWQWQFQFFVRSVPTGRSMVMTGFAEETVESVLRRMEWETKIRMSELRVIYNGRQLQLEQSLEECGIEKDSMVHLVGHLRSGGYPEAWRAIDYMVSVLAQVCRGEQETLASEGLRTVKLLVTCHFSLPGFAEVFASSKAPSMLAWLYAWPRGGSREHAEDCISHLLSCCRATKNSQSGSVGAVLELCKQLRELKCESNDVLYVSCRDVLSFLLETVGVSYGSGKVKHRVSLRDVFSFVPELVDRLLMSLNCGMKVVVASTKPLFGEVKDFATFVRPLRSRMSMGQCLGFFSSDEKCNVKGDEEDQLLAEEVDYLRVAFVRLLSKMDECLQRMGERLAGKEKRVTGFVVSHSWSEYLNILKELYGISKVFDGAEEMFWRVLMHHRSMLSVLITAFVKRGRGNDHRWILENKSVTNFECRRHLAMELFPSGKEFYDLFHEMLIDRSQLLAQSFEYIGRAKPESLRSGLFIEFKNEEATGPGVLREWFVLVCRAIFNPQNTLFLACPNDCRRFYPNPASRVHPLHLEYFRFSGRIIALALIKKVQVGIVFDRVFFMQLAGNYVTLEDIRDADPYLYRSCKQILEMDADFIDSDALGLTFVREVEVLGCREMVELCPGGRSLVMNSKNREKYVDLLIQNCFVSHFAKGFADILSNSKLQQFFQCLELEDLDWMLYGSEKPISIEDWKAHTKYKGYKESDCQISWFWECSKKGPYCFLESIGVFATYKIVGRMSAKQMKVLLFFWTSVKYLPVEGFRGLASNLYIHMALEPKNSLPTSHTCFYQLCFPPYSSKAVMQDRLGVITQEHIGCSFGYS 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15773g00002 832 Gene3D Hect, E3 ligase catalytic domains 462 687 - -
Mupr15773g00002 832 PANTHER HECT DOMAIN UBIQUITIN-PROTEIN LIGASE 47 830 - -
Mupr15773g00002 832 Pfam HECT-domain (ubiquitin-transferase) 745 824 IPR000569 GO:0004842
Mupr15773g00002 832 ProSiteProfiles HECT domain profile. 480 832 IPR000569 GO:0004842
Mupr15773g00002 832 Pfam HECT-domain (ubiquitin-transferase) 509 726 IPR000569 GO:0004842
Mupr15773g00002 832 SUPERFAMILY Hect, E3 ligase catalytic domain 453 817 IPR035983 GO:0004842
Mupr15773g00002 832 ProSiteProfiles Ubiquitin domain profile. 28 104 IPR000626 GO:0005515
Mupr15773g00002 832 SMART ubq_7 28 100 IPR000626 GO:0005515
Mupr15773g00002 832 Gene3D Hect, E3 ligase catalytic domain 580 661 - -
Mupr15773g00002 832 Gene3D - 27 107 - -
Mupr15773g00002 832 CDD HECTc 459 830 IPR000569 GO:0004842
Mupr15773g00002 832 Pfam Ubiquitin family 31 102 IPR000626 GO:0005515
Mupr15773g00002 832 Gene3D Hect, E3 ligase catalytic domain 696 830 - -
Mupr15773g00002 832 SMART hect_3 478 830 IPR000569 GO:0004842
Mupr15773g00002 832 SUPERFAMILY Ubiquitin-like 36 107 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15773g00002 Mupr-Chr15773 8149 13954 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15773g00002 29 104 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 30.263 2.68e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15773g00002 - - gmx:100789233 892.493