Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1576g00001 ATGTTGCACTGTGAGAACACGTCGGGGGACATGACAGTGTTGGAAAGGCAGAGGGCGAGGATGAAGTGGCAGGAAGAGCAAGGGTACTATTCTGGAACTGGCTTCAACGGTGTCTTCTCTTCTTCTTCTTGTTCTTCTTCTTGTTCATCTTCACTGGACGTTCACGAGTCCATGATGGTGGCTGCTGATTCGGGTTCAGCACTTGCGGAGGTGGTGGCTCGCTCCATCAATATGCCTCCAGGATTTGATGCCAATTCTTCAATGTCAAGAACCTTTAGCTGTCCAGCTGACTCTTCAACTAGGAAAGACAGTTTCAAGAAGAAGAAACCTGACATGCCTCACAATCTCAAGGATGGCAAACACAAGAGGATCAAAGTCGCTGCTGCCGACGATGGAGAATCCAAGAGTAACACAACAAACGCAAATAGCATCAACACAGAAACCTGTGAAGATACTTCCAATTCCAAGCAAAATTCAAAACCCTCCCAGCTTCCAAAGCCAGATTACATTCATGTCCGAGCGCGTCGTGGCCAAGCCACCGATAGCCATAGCTTAGCCGAAAGAGTTAGAAGGGAAAAAATTAGCGAGAGAATGAAGTATTTGCAAGATTTGGTACCTGGTTGCAACAAAATCACGGGAAAAGCTGGAATGCTCGATGAAATCATCAACTACGTTCAATCTCTGCAACGACAAGTTGAGTTTCTCTCAATGAAATTAGCTGCTGTTAACCCAAGTCTTGACTTCAGTATTGATGATGTATTTGAAAAAGAGGTGTTTCCTGCTTGTGCTGCAAATTTTCCAAACATAGGAATGTCATCATCAGACATGATTAATCCTGCCTATCTTCAATTTAATTCCCCGCAACAAATTGTTTCATACGGAGGATTAGACACGGGGATTAACCCCTCCGATGTGGGGCCAAGAAGGACCATAAGCGCCCCTGTATCAATGCCTGAAACATATCTTCACTCTTCCTGTTTCACACAAATGCTACCCTCCTCAACAACATGGGAAGGTGATTTCCAAAACTTTTGCAATTTGGATTTTGATCAAGCGCGAGCGACATCTTTCCCTTCTCAGCTGTTCTCAGGTCTAGTTGAAGCTGGCAATCTAAAGATGGAGATGTAG 1128 0.4477 MLHCENTSGDMTVLERQRARMKWQEEQGYYSGTGFNGVFSSSSCSSSCSSSLDVHESMMVAADSGSALAEVVARSINMPPGFDANSSMSRTFSCPADSSTRKDSFKKKKPDMPHNLKDGKHKRIKVAAADDGESKSNTTNANSINTETCEDTSNSKQNSKPSQLPKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPSLDFSIDDVFEKEVFPACAANFPNIGMSSSDMINPAYLQFNSPQQIVSYGGLDTGINPSDVGPRRTISAPVSMPETYLHSSCFTQMLPSSTTWEGDFQNFCNLDFDQARATSFPSQLFSGLVEAGNLKMEM 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1576g00001 375 Gene3D - 175 247 IPR036638 GO:0046983
Mupr1576g00001 375 MobiDBLite consensus disorder prediction 80 167 - -
Mupr1576g00001 375 Pfam Helix-loop-helix DNA-binding domain 182 229 IPR011598 GO:0046983
Mupr1576g00001 375 CDD bHLH_AtBPE_like 168 253 - -
Mupr1576g00001 375 MobiDBLite consensus disorder prediction 132 164 - -
Mupr1576g00001 375 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 70 285 IPR024097 GO:0006355
Mupr1576g00001 375 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 228 IPR011598 GO:0046983
Mupr1576g00001 375 FunFam Basic helix-loop-helix transcription factor 175 247 - -
Mupr1576g00001 375 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 176 246 IPR036638 GO:0046983
Mupr1576g00001 375 MobiDBLite consensus disorder prediction 80 99 - -
Mupr1576g00001 375 MobiDBLite consensus disorder prediction 100 130 - -
Mupr1576g00001 375 SMART finulus 184 234 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1576g00001 Mupr-Chr1576 10873 13204 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1576g00001 10 290 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 44.702 1.36e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr1576g00001 HLH 2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1576g00001 - - gmx:100798855 542.347