Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1574g00006 ATGTTGCACAGAAGCTTCAAGCCCCCAAACAAAACGGCATTGAAGCTCGCCGTTTCACGCATAAAGCTTTTGAAGAATAAGAGAGAAGCGCAAGTGAAGCAACTCAAGAGAGAGTTGGCTCAATTGCTCGAGTCTGGTCAGGACCAAACTGCTAGAATCCGGGTTGAACATGTTGTCAGGGAAGAGAAGATGATGGCAGCTTATGATCTTGTTGAGATATACTGTGAACTCATCGCAGCACGCTTGCCCATGATCGAATCACAAAAAAACTGCCCCATTGACTTGAAGGAAGCAGTTTCAAGTGTAATATTTGCAACTCCAAGATGTTCAGACATACCAGAGCTCATGGATGTGAAGAAGCAAATCACATCTAAGTACGGAAAAGAATTTGTCTCAGCAGCTGTTGAATTACGCCCTGACTGTGGTTTGGTTGAGAAATTGTCTGCCAAAGCGCCTGATGGTCCAACCAAGATAAAAATACTGGCTGCAATTGCGGAGGAGCATAATATCAAATGGGAACCCAAATTATTTGGAGAAAATGATGTGAAGTCTTCTCAAGACTTGTTGGTTGGGCCAAGTACTTTAGCGTACACAGAACCTTCTCAAATCCATGTTCAACCTGTTCATGATGAAAGGGATCCTTCTAATTTACGTGCTTCCTCACAACTTCAGCCAATGCATCATGCATCTACAGATTCATATGAGCAGACTGCAAGTGGTACTACTAGAAAGGATCAGTCAACAACATCAGGCTTGTCTAATCAAGAAATCAAATCATCAGGAACTGGAAGTCAAGAAATGGCTATTCAACACTCATACTCTGAAAATAAGAGTGCTTTCCCTTTGAGTAGGCAGAATTGGAACATGGAATTCAAGGATGCTGCCTCTGCTGCGCAGGCAGCTGCAGAATCTGCAGAACGTGCTAGTATGGCTGCACGGGCAGCTGCAGAACTTTCGAACCGGGAAAACATGTCAAGGCAGTATTCAAGTGAATCACATAGTTCTTCTGTTAGCAGGTTGAGAGATGAAAGACCCCAAGAATATGCTTTTCATGATAACAAAAATCTTTCTACAGGTTCTGTTGATAGCAACTACCATAGAAGCAGTTCTGGGATGCACAAAGAACAAATTACTGGTAGAGAACAAGATAATCTGGTAGGAGCACCCAATGAACATTACAGGAATAGTCGTGAGAATGTGGTGAAACATGCCCAATCAGATTCGTTAATGTCTGGTAGTGCTTTTGGTGACAGTAAACCATTTACGGATGGTTCTCAAATGGCTGATATATATCAGCATAGTGACTCATTTGAGCAAAAGAATAGTGACTTACATGAAATGAGTATAAAAATGCCAGCAGACAGAGATGAAGAAGATTTTGTGAATGACCTATATGGTGACGGTGATTTGAATGCTGAAAACAATTATCACTTTGGAGATGCAGGGACAATTAGACAATCTAGAAAATCATCCTCTTCTCATTTCATTACTCCAACTGATGATGACAGTGATAATTTGGACTTGGATGGCTGGAAGACAAGGAACAAAGCTGTGGAAGACTTTTTTGTTACTGATGAAGTAAACACTCAGAGAAACATTATGGAAACAAGTTCTTATAATGATACTACTGTTGTATTTGATGATTCTGGATCAGAGGATGATGATCATAAATTTGATGTTGATAAAAAGTACAATGGTGAGGGGTCTAGTTTGTTCTCCTCATCCCCTGCTAGGAAATCACAAGTTGATCCATTAGAAAATACAAATTCTTGGAGCCATGGACAGAATATTGATACGAAAGGGACAAGTTATAGTACACAGTCACATTTTTCTGTGGTTTCTGAAAGATTGACCGAGTCACCAATTTCTTCTGAAAAAGAAGACCTGTTGCCTGTCACATTTGATGATTCAGATGACCCAGGTTCAGATAGCGATGTGGATTTGGTCAAGTCCAAGGTTTCTGGGATCTCTGACTATGGAAATTCTTTCCTTGATCAGATTGCAAACCATGGGGCTCTAGGGTCCTCATCAAGAAATGAGAAAAATGTTGGCCCTGACAGACAGTCTTGGTTGTCACCTTCTCCAGTTGGTTCGGACACTGTGGTAGAACATTTTGAGACAAAGGTGGACACCCCTACTGTGTCAGAAAAGAATTTTGGTTATGATGACTTGCTAGCCAGTCAGCCACCTTCAAAGGAAAGAAGCTCAAAATCAGGTTTGGATCTCAAGGAAAACAATGATACCGAGACTCTGGAGCCATATCGTATAGAAAGTGGCAAGGAACTAAACTACGGAACCTTGATGGGTGGTCTTCGCAATAAAGGTTTCAAGCGACCACCTTATATTAAGAATACATTGGATGATGTCTCATCTTCATTGGGGGACACTTCAGTCCAGAATGAAAGATCTTTGTCTACAGTGAGGACTTCAATTGGTTTTGATGCTCCTGTTCAGGACAAGTACACGAGGGAAGTGAGCAGAGGAAACAGTACTGTGGGCTTGGGAGCGCACAACATATCTTCTGATTTTGATAGTTATGATGTGGTTGCAAATTCACCAGAGACTCTTGCTAGTACTCATGAACCACACATTCCGAAAGAGCAAAGTGAAGGAAAAAAGAAATCAAGCTCAAGGGCCTCTGCTACATACTTCGATTCTGATAATAGTGATTCTGAAGATAAACTTCCTAAACAAAATTCACCTAGTCTTGCCCGTCCTGTTAGTGGAATATCTCGAAGGACATCACCTTCTTCTAAAGCTGGTACAGGTTTAAGTTCAAAGGATGCTCCTTCATCCAAGGCTTCGGTGACTCCTGCTACAACACTTGGGTGGAAATCTTCAAGGACTTCTTATGAGAGTAACAATCAAAATGCTTCATCAATAAGGAAGAGCTCTGAAAATTGGACAGGATCTAAGCCTGTATCAGCTGAAAATAAAGCAACTGGGCCAGTTGTAGAACCTAATAGATCCTTGGATGGGGGAATTTTGAAATCATCGGCAAGGGTGCAACCTTCCAGTTCTCCCAAAACAGTGGTAAAAGATAATGAAGAGGGCCAAGAGGCTTTAAAATCTCTCCATTCTTTTGGAGATACTCCATCTAAGGAGAAAGGTGGGCACGTTCATCCTAAGTTACCTGACTATGATTCTTTTGCTGCCCACTTCCTGTCTCTGAAGAAGGGTCTTAAGCTTCAACATTCTAAGCTCATTCAGGTTCTTTTGTCTCGGCTTATAATGTTGGTCTTGCTGGATTCCAGAGAAATGGAAAACATCAAAGATCCATCAATTTACCGCAATCCAGTCATACTGCAGAGCGAGGACTTGACCAAGTATATACTGGAGACTGCTGTTTACCCTCGAGAACCTAAGCCACTGAAGGAGCTGAGGGAAGCCACTAGTAATCCCCCTTGGGGCTTCATTGCTACTTTACCTGATGCGGGTCAGCTGATCACCTTACTTTTGAAGCTGTTGAATCCCAAAAAGACCATTGAAGTGGGAGTGTTTACTGGCTACTCCCTTCTCCTCACTGCACTTAACATTCCTGATGATGGAAAGATTACAGCCATAGACATTGACAGGAAAGCTTATGAGGTTGGTTTACCAGTCATCAAAAAGGCTGGAGTGGAGCACAAGATTAATTTCATTGAGTCCCCGGCCCTACCAATTTTGGATAAACTACTTGAAGATCCTGCAAATGAAGGATCTTTTGACTTTGCCTTCATTGATGCTGACAAAGAGAACTACTTGAACTACCATGAGAGGCTCATAAAACTGGTAAAGGTTGGTGGGTTACTTATATATGACAACACATTGTGGGGTGGACGTGTTTCGTGGCCTGAAGACAAAGTTGCACCACACAACAAACCAGGGACGGACGCAGCAATTGAGTTTAACAAAAGAATCACAAACGATTCTCGCGTTGAATTTGCTCTTACTTCCGTAGGGGATGGGCTCAATATTTGTAGGCGCGTTGCTTGA 3975 0.4201 MLHRSFKPPNKTALKLAVSRIKLLKNKREAQVKQLKRELAQLLESGQDQTARIRVEHVVREEKMMAAYDLVEIYCELIAARLPMIESQKNCPIDLKEAVSSVIFATPRCSDIPELMDVKKQITSKYGKEFVSAAVELRPDCGLVEKLSAKAPDGPTKIKILAAIAEEHNIKWEPKLFGENDVKSSQDLLVGPSTLAYTEPSQIHVQPVHDERDPSNLRASSQLQPMHHASTDSYEQTASGTTRKDQSTTSGLSNQEIKSSGTGSQEMAIQHSYSENKSAFPLSRQNWNMEFKDAASAAQAAAESAERASMAARAAAELSNRENMSRQYSSESHSSSVSRLRDERPQEYAFHDNKNLSTGSVDSNYHRSSSGMHKEQITGREQDNLVGAPNEHYRNSRENVVKHAQSDSLMSGSAFGDSKPFTDGSQMADIYQHSDSFEQKNSDLHEMSIKMPADRDEEDFVNDLYGDGDLNAENNYHFGDAGTIRQSRKSSSSHFITPTDDDSDNLDLDGWKTRNKAVEDFFVTDEVNTQRNIMETSSYNDTTVVFDDSGSEDDDHKFDVDKKYNGEGSSLFSSSPARKSQVDPLENTNSWSHGQNIDTKGTSYSTQSHFSVVSERLTESPISSEKEDLLPVTFDDSDDPGSDSDVDLVKSKVSGISDYGNSFLDQIANHGALGSSSRNEKNVGPDRQSWLSPSPVGSDTVVEHFETKVDTPTVSEKNFGYDDLLASQPPSKERSSKSGLDLKENNDTETLEPYRIESGKELNYGTLMGGLRNKGFKRPPYIKNTLDDVSSSLGDTSVQNERSLSTVRTSIGFDAPVQDKYTREVSRGNSTVGLGAHNISSDFDSYDVVANSPETLASTHEPHIPKEQSEGKKKSSSRASATYFDSDNSDSEDKLPKQNSPSLARPVSGISRRTSPSSKAGTGLSSKDAPSSKASVTPATTLGWKSSRTSYESNNQNASSIRKSSENWTGSKPVSAENKATGPVVEPNRSLDGGILKSSARVQPSSSPKTVVKDNEEGQEALKSLHSFGDTPSKEKGGHVHPKLPDYDSFAAHFLSLKKGLKLQHSKLIQVLLSRLIMLVLLDSREMENIKDPSIYRNPVILQSEDLTKYILETAVYPREPKPLKELREATSNPPWGFIATLPDAGQLITLLLKLLNPKKTIEVGVFTGYSLLLTALNIPDDGKITAIDIDRKAYEVGLPVIKKAGVEHKINFIESPALPILDKLLEDPANEGSFDFAFIDADKENYLNYHERLIKLVKVGGLLIYDNTLWGGRVSWPEDKVAPHNKPGTDAAIEFNKRITNDSRVEFALTSVGDGLNICRRVA 1324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1574g00006 1324 MobiDBLite consensus disorder prediction 351 372 - -
Mupr1574g00006 1324 Pfam O-methyltransferase 1114 1323 IPR002935 GO:0008171
Mupr1574g00006 1324 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1100 1323 IPR002935 GO:0008171
Mupr1574g00006 1324 MobiDBLite consensus disorder prediction 856 1016 - -
Mupr1574g00006 1324 MobiDBLite consensus disorder prediction 336 350 - -
Mupr1574g00006 1324 PANTHER O-METHYLTRANSFERASE-RELATED 1098 1323 - -
Mupr1574g00006 1324 MobiDBLite consensus disorder prediction 860 874 - -
Mupr1574g00006 1324 MobiDBLite consensus disorder prediction 673 698 - -
Mupr1574g00006 1324 MobiDBLite consensus disorder prediction 313 376 - -
Mupr1574g00006 1324 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1104 1322 IPR029063 -
Mupr1574g00006 1324 MobiDBLite consensus disorder prediction 716 755 - -
Mupr1574g00006 1324 Coils Coil 18 52 - -
Mupr1574g00006 1324 MobiDBLite consensus disorder prediction 320 335 - -
Mupr1574g00006 1324 MobiDBLite consensus disorder prediction 895 976 - -
Mupr1574g00006 1324 MobiDBLite consensus disorder prediction 217 267 - -
Mupr1574g00006 1324 MobiDBLite consensus disorder prediction 568 619 - -
Mupr1574g00006 1324 CDD AdoMet_MTases 1162 1266 - -
Mupr1574g00006 1324 MobiDBLite consensus disorder prediction 568 644 - -
Mupr1574g00006 1324 MobiDBLite consensus disorder prediction 543 562 - -
Mupr1574g00006 1324 Gene3D Vaccinia Virus protein VP39 1094 1324 IPR029063 -
Mupr1574g00006 1324 MobiDBLite consensus disorder prediction 673 696 - -
Mupr1574g00006 1324 FunFam IST1-like protein isoform A 1 181 - -
Mupr1574g00006 1324 Gene3D - 1 181 IPR042277 -
Mupr1574g00006 1324 MobiDBLite consensus disorder prediction 199 267 - -
Mupr1574g00006 1324 MobiDBLite consensus disorder prediction 485 504 - -
Mupr1574g00006 1324 MobiDBLite consensus disorder prediction 485 499 - -
Mupr1574g00006 1324 Pfam Regulator of Vps4 activity in the MVB pathway 11 171 IPR005061 GO:0015031
Mupr1574g00006 1324 MobiDBLite consensus disorder prediction 736 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1574g00006 Mupr-Chr1574 29559 39695 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1574g00006 1101 1323 Monolignol Biosynthesis Gene Families AT4G26220 61.435 2.16e-92 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1574g00006 - - gmx:100791547 1596.25