Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1570g00002 ATGGCTTCTCTTTTCTACCTTTCTCTCTCCCTCGTCGTAACCCTCTCCTCCGCCACCCACCAACACCCCTCCTCGCACGATTCCACCATCACCTCCGCCCACCATCACCACCTCCCGCCCATCTCCACCGTCACCAACATCGTTCCGGTGATCCAACAAGCCTGCATAGCCACACGCTTCCCGCAGCAATGCGAATCCTCCTTCTCCCTGTTGCCTAACCTCCCTCTGAACCCTACCCCTCTCCAGATCCTCCAATCCGCCATCGCCCTCTCCTCCTCCAATCTCATCACCGCGCAATCCATGGTGACGGCCATCCTCACCGCCTCCGCCGGCAATCAAAATCGCACCGTCGCCGCTTCCACCTGCATCGAAATACTAACCAACTCGCAGCAGCGCATCTCTCTCGCTGCGGACGCGCTGCCGCTCGGCAGAACCAAGGATGCGCGCGCGTGGCTCAGCGCCGCCCTCGCCTACCAGTACGACTGCTGGAACAGCCTCAAATACGCCAACGACACCGATATGGTCGCTAAAGCGATGTCGTTTATCGACAGCCTCTCCTCGCTCTCCAGCATTGCCCTCAGCATGGTCTTCTCCTTCGACGCTTTCGGAAGCAACGTTACGGCGTGGAAGGTGCCCGTCACGGAGCGTGACGGCTTCTGGGGGATCGCCGTCCCGGGCGGACCCAGCTCCGACGGAGGGGTTCCGTCCAATTTGAAGCCCGACGTTACGGTCTCTAAGGAGGAAGGGGACGGGTATTATAAGACGGTGCAGGAGGCCGTTAACGCGGCGCCGGATAACCTCGACAGTACGCAGAGGTTTGTGATTTACATAAAACAAGGAGTGTATGAGGAGACAGTTAGGATTCCGTCAAAGAAAAAGAATGTGGTCTTCTTGGGCGACGGTATGGGCAAGACGGTTATCACAGGCAGCGCTAACGTGGGCCAACCCGGGATGACAACTTTCCACAGTGCCACAGTCGCGGTGACTGGCGATGGGTTCATGGCAAAGGATTTGACGATCGAAAACACAGCAGGTCCGGATGCTCACCAAGCAGTGGCCTTCAGATTAGACAGTGATAGGTCGGTGATAGAGAGCTGTGAATTATTGGGCAATCAAGACACACTTTATGCTCACTCCCTGCGCCAGTTCTACAAGTCATGCCGCATAGAGGGCAACGTGGACTTCATCTTCGGGAACGCCGCTGCGTTTTTCCAAGACTGCCAGATCCTAATTCGTCCCAGGCAACTGAATCCAGAGAAGGGCGAGAACAACGCTGTCACTGCACATGGCAGGACCGACCCTGCACAAGCCACTGGCTTTGTTTTCTTCAACTGCTTGATTAACGGCACTGACGAATACATGACCTTGTACCACAGCAAGCCTCATGCCCACAAGAACTATCTTGGGAGGCCTTGGAAGGAGTATTCTAGAACTGTTTTCATCAATTCAAACCTCGAGTCCCTCGTCATGCCCCAGGGTTGGATGCCATGGAGTGGTGACTTTGCTCTCAAGACACTTTACTATGGGGAGTTTGAGAACACCGGACTCGGTTCTGATTTGTCTCAGAGGGTGCCTTGGAGTAGCAAGATCCCTCCTCAGCACGTGTTAACTTATTCCGTGCAGAATTTCATTCAAGGAAATGAATGGATTCCACTATAA 1659 0.5491 MASLFYLSLSLVVTLSSATHQHPSSHDSTITSAHHHHLPPISTVTNIVPVIQQACIATRFPQQCESSFSLLPNLPLNPTPLQILQSAIALSSSNLITAQSMVTAILTASAGNQNRTVAASTCIEILTNSQQRISLAADALPLGRTKDARAWLSAALAYQYDCWNSLKYANDTDMVAKAMSFIDSLSSLSSIALSMVFSFDAFGSNVTAWKVPVTERDGFWGIAVPGGPSSDGGVPSNLKPDVTVSKEEGDGYYKTVQEAVNAAPDNLDSTQRFVIYIKQGVYEETVRIPSKKKNVVFLGDGMGKTVITGSANVGQPGMTTFHSATVAVTGDGFMAKDLTIENTAGPDAHQAVAFRLDSDRSVIESCELLGNQDTLYAHSLRQFYKSCRIEGNVDFIFGNAAAFFQDCQILIRPRQLNPEKGENNAVTAHGRTDPAQATGFVFFNCLINGTDEYMTLYHSKPHAHKNYLGRPWKEYSRTVFINSNLESLVMPQGWMPWSGDFALKTLYYGEFENTGLGSDLSQRVPWSSKIPPQHVLTYSVQNFIQGNEWIPL 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1570g00002 552 Pfam Pectinesterase 241 547 IPR000070 GO:0030599|GO:0042545
Mupr1570g00002 552 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 50 196 IPR035513 -
Mupr1570g00002 552 CDD PMEI-like_3 54 176 - -
Mupr1570g00002 552 FunFam Probable pectinesterase/pectinesterase inhibitor 51 49 198 - -
Mupr1570g00002 552 NCBIfam pectinesterase inhibitor domain 50 195 IPR006501 GO:0004857
Mupr1570g00002 552 FunFam Pectinesterase 235 552 - -
Mupr1570g00002 552 Pfam Plant invertase/pectin methylesterase inhibitor 50 195 IPR006501 GO:0004857
Mupr1570g00002 552 Gene3D Invertase/pectin methylesterase inhibitor family protein 49 198 IPR035513 -
Mupr1570g00002 552 Gene3D - 235 552 IPR012334 -
Mupr1570g00002 552 SUPERFAMILY Pectin lyase-like 238 551 IPR011050 -
Mupr1570g00002 552 SMART PMEI_2 46 195 IPR006501 GO:0004857
Mupr1570g00002 552 PANTHER PECTINESTERASE 20 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1570g00002 Mupr-Chr1570 35244 37920 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1570g00002 40 552 Carbohydrate Esterase AT5G09760 62.934 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1570g00002 - - gmx:100819675 820.846