Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15707g00001 ATGGATATGGATATGGATAGGTCCTATTGCCTTGACTCCTACTTCCCTGCCCCCAAGACCGAGCACATTTTCAATGACCGGTTACTACCCATTGTCAATGTTGACATCCATGAAGTCAAGAACTTTAGTTCTCCAACACATGGAATCAGAATGAACCTCAAGACCCAAGAAATAGTGAAGATCACCAAGCATTGCTTGCAGGAAGCTCGTAAGCGTTTTGATAAAGCTGCTCTTGTATATGACCAGGCTCGTGAAAAGTTTATGTCACTGAGAAAAAGCACCAAGATTGACATTGCCACTGTCATAGAAGAGGAATTACAGGATGCAAGAACATCATTTGAGGAAGCCCGTTTCAATCTGGTTGGCACTCTTAATAACATTGAGGTCAAGAAGAGATTTGAATTTTTAGAGTCTGTAACTGGAATTATGGATGCTCATCTTCGATACTTTCAACAGGGGTATCAGCTATTACATCAGATGGAGCCTTTCATTAGTGAGATTATGGATTATGTACATCAGTCAAGAGAAAGTTACAATAAGGAGCAGATTGCACTTTATAAAAGAATGCAAGACTACAAAAAACAAGTTTATGAAGAAAGTAGATTGTCCTTGAATGGTCCTTATGGTTCTCCTAGTAGAGACTCCGCGCAACCATTTTCTAGGATGTCAAATGAAGTGGCAGATGTAGTAATGGAATCGGCTGCAAATGGGAAGGTTCATATCATTCGGCAAGGATATCTTTCAAAACGATCCTCCAATTTGAGAGGTGACTGGAAAAGAAGGTATTTTGTTCTGGACAGTCGAGGAATGTTGTACTACTACCGCAAACCATGGAGTGGAAGCAAGCAACTATCTCCAAAGAGGAATAGTGGCGCTGAAAATGGTTCTGGGCTTCTGAGCCGATGGCTTTCTTCTCATTACCATGGAGGTGTCCATGATGAAAGATCTATAGCACGTCATACAGTCAACCTGCTGACATCAACAATCAAGGTTGATGCTGATCAGTCAGATTTAAGGTTCTGCTTCAGGATTATTTCGCCATCAAAGAACTATACATTGCAGGCAGAAAATGCAGTGGACCAAATGGATTGGATGGAAAAGATAAATGGAGTAATTGCCTCCTTGTTGAGTGTCCAAACACTAGGAACGCCTCTATCAGCTGACTCAGAAAACGGTGACTCTCACTCTGACAACAACATTGATAAGTCCGAAAGTTCTCTAGATGATGATCACACTGTGACTGCGAAGTCTGCATCCAAGAATTCCACCCCTAATAACCACTTACGTTGCTCTAGAAGTATGCAGTTGCATAAACACATTACAAGAAGTGAAAAGCCAATTGATGTTCTTAGAGGGGTGAGCGGAAATGACAAATGTGCTGATTGTGGTAAACCTGAACCAGACTGGGCATCCTTAAACCTTGGCATCCTTATATGCATTGAGTGTTCTGGTGTTCATCGTAATCTTGGTGTACATATATCAAAAGTAAGATCACTGACACTTGATGTTAAAGTCTGGGATCCCTCTGTCTTAAGTATGCTAAAGTCACTAGGCAATCTTTTTGCAAACTCAGTTTGGGAGGAGCTGCTGCATTCACCGAGTAATTTGCAAAATATTGACACCCCTGCCGGTTCATCCAAGGAAAATGGAGAGCAGCTATTTCATGCAAGAAAACCAAAGCATGATGATTCTATTTCATTAAAGGAAAGGGGGAGCTGCCAGCGTTTGTGGGAGCAGACCCAATTTGTTGGATTGCTAGGGCTGAAAATTTCTGAGATACAAGAAGTACATTCATTCCATAAGCTACAATATGCATTCATAAGCACGAAGGGTGTGGCAATGCATTGGTTCTACTTTTGGAGCCAAAAGACCGATTCAAATTGGGAGTCATTTTCCACAGCTTTGATAAGAAGATTCGATGATAGCTATACATTTATTGGCAATCTTAATATATGGGAGATAGAACTTAACGGTTTCTTATTGCAGTATTCTGAGAAAATATTTATTCACCGGACAAAGGAAAACCACACTCTCCCTTCACTGGCACAACAGGTGCAGGAAAGCATCTGCGCCAATGACAAGAAGGCAGTGTACCAGCATATTGTGAAGTCAGATGTTGACATCAATGCCATCAGTTGGCAACCATTGTCTGATGACTCTTTCAACATGGCTTCTTCAAGTAATTTAAACGTTGCATCTGAAAATCCGCTCATTGAGGACTTACAAGATGGTTCTAGCTTGCTTCACCTGGCATGCCTAACTAGTGACGTTGGCATGGTTGAGCTGCTCCTACAGTATGGGGCAGATATAAATGCTTGTGAGTCTACAGGTCGGACACCACTGCATTATTGTATTATTAGTGGGAAGGCCGCGGCTGCAAAAGTGCTTATCTCAAGGGGGGCCAATACACTTATCGCAGATAAAGAAGGCAACACTCCTATTAAGCTTGCATCAGAATCCGGCTGTGTTGGCAATGAAATTCTCACTCTCTTGGCTAGCAGATGA 2505 0.4184 MDMDMDRSYCLDSYFPAPKTEHIFNDRLLPIVNVDIHEVKNFSSPTHGIRMNLKTQEIVKITKHCLQEARKRFDKAALVYDQAREKFMSLRKSTKIDIATVIEEELQDARTSFEEARFNLVGTLNNIEVKKRFEFLESVTGIMDAHLRYFQQGYQLLHQMEPFISEIMDYVHQSRESYNKEQIALYKRMQDYKKQVYEESRLSLNGPYGSPSRDSAQPFSRMSNEVADVVMESAANGKVHIIRQGYLSKRSSNLRGDWKRRYFVLDSRGMLYYYRKPWSGSKQLSPKRNSGAENGSGLLSRWLSSHYHGGVHDERSIARHTVNLLTSTIKVDADQSDLRFCFRIISPSKNYTLQAENAVDQMDWMEKINGVIASLLSVQTLGTPLSADSENGDSHSDNNIDKSESSLDDDHTVTAKSASKNSTPNNHLRCSRSMQLHKHITRSEKPIDVLRGVSGNDKCADCGKPEPDWASLNLGILICIECSGVHRNLGVHISKVRSLTLDVKVWDPSVLSMLKSLGNLFANSVWEELLHSPSNLQNIDTPAGSSKENGEQLFHARKPKHDDSISLKERGSCQRLWEQTQFVGLLGLKISEIQEVHSFHKLQYAFISTKGVAMHWFYFWSQKTDSNWESFSTALIRRFDDSYTFIGNLNIWEIELNGFLLQYSEKIFIHRTKENHTLPSLAQQVQESICANDKKAVYQHIVKSDVDINAISWQPLSDDSFNMASSSNLNVASENPLIEDLQDGSSLLHLACLTSDVGMVELLLQYGADINACESTGRTPLHYCIISGKAAAAKVLISRGANTLIADKEGNTPIKLASESGCVGNEILTLLASR 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15707g00001 834 FunFam ADP-ribosylation factor GTPase-activating protein AGD1 426 584 - -
Mupr15707g00001 834 CDD ArfGap 447 570 - -
Mupr15707g00001 834 PANTHER CENTAURIN/ARF 19 570 IPR045258 GO:0005096
Mupr15707g00001 834 Gene3D Arf GTPase activating protein 430 571 IPR038508 -
Mupr15707g00001 834 ProSiteProfiles Ankyrin repeat region circular profile. 776 808 - -
Mupr15707g00001 834 Gene3D - 668 832 IPR036770 -
Mupr15707g00001 834 Pfam BAR domain of APPL family 57 180 IPR004148 GO:0005515|GO:0005737
Mupr15707g00001 834 ProSiteProfiles Ankyrin repeat profile. 776 808 IPR002110 GO:0005515
Mupr15707g00001 834 SUPERFAMILY PH domain-like 151 373 - -
Mupr15707g00001 834 Pfam Putative GTPase activating protein for Arf 448 536 IPR001164 GO:0005096
Mupr15707g00001 834 Gene3D Arfaptin homology (AH) domain/BAR domain 54 198 IPR027267 -
Mupr15707g00001 834 SMART PH_update 241 375 IPR001849 -
Mupr15707g00001 834 SUPERFAMILY ArfGap/RecO-like zinc finger 444 533 IPR037278 -
Mupr15707g00001 834 Pfam PH domain 242 372 IPR001849 -
Mupr15707g00001 834 Coils Coil 66 86 - -
Mupr15707g00001 834 SMART arf_gap_3 444 561 IPR001164 GO:0005096
Mupr15707g00001 834 ProSiteProfiles Ankyrin repeat region circular profile. 743 772 - -
Mupr15707g00001 834 MobiDBLite consensus disorder prediction 394 415 - -
Mupr15707g00001 834 Pfam Ankyrin repeats (3 copies) 748 832 IPR002110 GO:0005515
Mupr15707g00001 834 MobiDBLite consensus disorder prediction 385 428 - -
Mupr15707g00001 834 ProSiteProfiles Ankyrin repeat profile. 743 775 IPR002110 GO:0005515
Mupr15707g00001 834 ProSiteProfiles PH domain profile. 240 373 IPR001849 -
Mupr15707g00001 834 Gene3D - 233 381 IPR011993 -
Mupr15707g00001 834 PRINTS HIV Rev interacting protein signature 456 475 IPR001164 GO:0005096
Mupr15707g00001 834 PRINTS HIV Rev interacting protein signature 498 519 IPR001164 GO:0005096
Mupr15707g00001 834 PRINTS HIV Rev interacting protein signature 475 492 IPR001164 GO:0005096
Mupr15707g00001 834 SUPERFAMILY BAR/IMD domain-like 65 263 IPR027267 -
Mupr15707g00001 834 CDD PH_ACAP 243 377 - -
Mupr15707g00001 834 SMART ANK_2a 776 805 IPR002110 GO:0005515
Mupr15707g00001 834 SMART ANK_2a 743 772 IPR002110 GO:0005515
Mupr15707g00001 834 SUPERFAMILY Ankyrin repeat 690 823 IPR036770 -
Mupr15707g00001 834 ProSiteProfiles ARF GTPase-activating proteins domain profile. 444 527 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15707g00001 Mupr-Chr15707 13 14419 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15707g00001 454 547 C2H2 Transcription Factor Family AT4G21160 50.526 4.85e-20 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15707g00001 K12489 - gmx:100792517 935.25