Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15698g00001 ATGGAGGACAACCCTAGTTCATCCAGAGTTGACAGAAAATTAGTTGAGAGGAATAGAAGGAACCAAATGAAAGCTCTCTTCCGCAAACTCAACTCACTTGTGCCTCGTCAAAGATCAAGGGTTTTCCCCTCTTTCACTCAACTCCTTCTATCTTCTCTTATCAAAGCCATGCATTATGTAGGGGCCATTCCACTGCCGGATCAGCTAGAAGAAGCCACAAACTACATAAAGAAACTACAGGTGAATCTGGAGAAAATGAAGGAGAAGAAGAACGTGCTACTAGGAATTGAAAGGTCGAATGTGAGAATGAATGGAGGCAATAAGAGCGTGGGGTTAAAATGTCCACGAATTGAGATCCAACAAATGGGTTCAGCCTTAGAGGTTGTTCTAATAACCGGGTTGGATTCTCAGTTCATGTTCAGTGAAACCATTCGTGTTCTTCATGAAGAAGGAGTAGATGTTGTTAATGCCAGTTATAGAGTTACTGAAGATGCAGTTTTCCACTCAATACACTGTCAGGACGGGGAATCTGCCAATGGAGCTGCCAGGATATCTCAGAGACTAAACAACTTTATCTATGATCAATGA 588 0.4218 MEDNPSSSRVDRKLVERNRRNQMKALFRKLNSLVPRQRSRVFPSFTQLLLSSLIKAMHYVGAIPLPDQLEEATNYIKKLQVNLEKMKEKKNVLLGIERSNVRMNGGNKSVGLKCPRIEIQQMGSALEVVLITGLDSQFMFSETIRVLHEEGVDVVNASYRVTEDAVFHSIHCQDGESANGAARISQRLNNFIYDQ 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15698g00001 195 Coils Coil 192 195 - -
Mupr15698g00001 195 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 7 79 IPR011598 GO:0046983
Mupr15698g00001 195 Coils Coil 69 96 - -
Mupr15698g00001 195 Gene3D - 6 105 IPR036638 GO:0046983
Mupr15698g00001 195 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 7 192 - -
Mupr15698g00001 195 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 94 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15698g00001 Mupr-Chr15698 1194 1934 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15698g00001 7 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 40.816 4.94e-40 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr15698g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15698g00001 - - gmx:100784418 276.944