Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15684g00001 ATGAGTGGCTTAGGATCTCCTTGTGGAGCCTGCAAATTCTTGAGAAGAAAATGTGTGAGAGGTTGTGTTTTTGCACCTTACTTTTGCCATGAGCAAGGTGCTACCCATTTTGCAGCCATTCATAAGGTCTTTGGTGCAAGCAATGTTTCTAAGCTCCTTGCTCACCTCCCTGTGAGTGACCGTTGTGAAGCTGCAGTCACAATCTCATATGAAGCTCAAGCCAGACTTCAGGATCCAATTTATGGCTGTGTCTCCCATATTTTTGCACTCCAACAACAGGTGGTCAATTTACAAGCACAGCTAGCTTATCTCAAGGAGCAAGCAGCTCAGAGTTGTCTCAATGGCTCTGTCAATGAAAACCCTAGTGAAAAATTACTTGAAAAATCTTCTGCTGCTTTACCCCAAGATCTTCAAAGTTGGTTTCAGGTGGAAAATTCCAACATGGGGCCGGAATTTCTTCCTAACTTGTGTACTAATTTGTCCTCAGCAACACAACATTATGGGAACAATGCTCTCATGGAAGATCCAAACCCTATTGGGATTAATTATGAAAATTCAGGAGGCATGGAAGAAAACAGCTCCTTCTCTAGCTTTGATGAGAGTTCTAACTACTCCATGTCCTATGACATGCAAACAAACAGGAGGACGTGGGGTTTTCATGAAGTGGAGGACCTACATTCAGTGGCTTTTGGATACGGAACTCGATATTCATGA 714 0.43 MSGLGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLAYLKEQAAQSCLNGSVNENPSEKLLEKSSAALPQDLQSWFQVENSNMGPEFLPNLCTNLSSATQHYGNNALMEDPNPIGINYENSGGMEENSSFSSFDESSNYSMSYDMQTNRRTWGFHEVEDLHSVAFGYGTRYS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15684g00001 237 Coils Coil 87 107 - -
Mupr15684g00001 237 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Mupr15684g00001 237 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Mupr15684g00001 237 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15684g00001 Mupr-Chr15684 2643 3518 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15684g00001 7 232 AS2 family AT3G58190 51.739 3.81e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr15684g00001 LOB 5.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15684g00001 K13945 - gmx:100776678 429.098