Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1567g00001 ATGAGAGGTAACAATAAACCAGCCATGTCTAGTCCAAAGAGAGTGAGCAGTTGTAGTGAAGATGACAATGAACTTAGAAGAGGGCCTTGGACTCTTGAAGAGGATAATTTTCTCTCCCAATACATTGCTAGTCATGGGGAAGGGCGATGGAATTTGCTGGCTAAACGTTCAGGATTGAAGAGAACTGGAAAAAGTTGCAGATTAAGGTGGTTAAATTATCTAAAACCAGATGTGAAACGGGGAAATTTAACCCCAGAAGAGCAGCTTTTAATACTTGAACTCCATTCAAAGTGGGGAAACAGGTGGTCAAAAATTGCACAACATTTGCCGGGCAGGACAGACAATGAAATCAAGAACTATTGGAGAACTAGGATTCAGAAACAAGCAAGACATTTGAAAATTGACACTGACAGCAGAGAGTTTCAAGAGCTAGTTAGGCGTTCCTGGATGCCAAGATTGCTTCAGAAAGCAAGAGAGTCATCATCTTCTTCAGCCATGGCAATTCAAAACCAAGCAATTCCTTTTCCTCTTGATGGTGTTTCTCATCATTCAACTATTGGGACCATACCATCACAAACCCCTTGGCTGAATGAAGCTGGTCCCACTTATATGGACCAACATGAACAGAACTCAGACTCTGAACATAACAATGGTTCATGCATCTCCTTTTCTGAGTCAGCAAATATTCCAAAAGTGTCTCAGCATTTTGGAGACACCATCACCCAATTTCATGCCTTGAATGGCAATGACTTTGGCACCTTCACATGTGATGGTTACCATCATCATGTAAATAACAATGCCTATGAGATGGACACTTTCAAAACACCAACTGCAAGGGTGGCTGAGGGTGTGCAGTACCCAATTGGTGATTGTCAAATGGCAGGAAGCAATTGGGTGAACAACGATTTTGCATGTAGTGGCATGTGGAACATTGATGATGAATTGTGGCAATTTAGCAAGTTACAAAAATAA 972 0.4146 MRGNNKPAMSSPKRVSSCSEDDNELRRGPWTLEEDNFLSQYIASHGEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPEEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRIQKQARHLKIDTDSREFQELVRRSWMPRLLQKARESSSSSAMAIQNQAIPFPLDGVSHHSTIGTIPSQTPWLNEAGPTYMDQHEQNSDSEHNNGSCISFSESANIPKVSQHFGDTITQFHALNGNDFGTFTCDGYHHHVNNNAYEMDTFKTPTARVAEGVQYPIGDCQMAGSNWVNNDFACSGMWNIDDELWQFSKLQK 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1567g00001 323 Pfam Myb-like DNA-binding domain 27 74 IPR001005 -
Mupr1567g00001 323 Pfam Myb-like DNA-binding domain 80 123 IPR001005 -
Mupr1567g00001 323 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 21 207 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mupr1567g00001 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 74 IPR017930 -
Mupr1567g00001 323 FunFam MYB transcription factor 83 125 - -
Mupr1567g00001 323 ProSiteProfiles Myb-like domain profile. 22 74 IPR001005 -
Mupr1567g00001 323 CDD SANT 84 123 IPR001005 -
Mupr1567g00001 323 MobiDBLite consensus disorder prediction 186 220 - -
Mupr1567g00001 323 FunFam Myb transcription factor 27 79 - -
Mupr1567g00001 323 MobiDBLite consensus disorder prediction 1 16 - -
Mupr1567g00001 323 Gene3D - 83 126 - -
Mupr1567g00001 323 ProSiteProfiles Myb-like domain profile. 75 125 IPR001005 -
Mupr1567g00001 323 SUPERFAMILY Homeodomain-like 25 121 IPR009057 -
Mupr1567g00001 323 MobiDBLite consensus disorder prediction 1 23 - -
Mupr1567g00001 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 129 IPR017930 -
Mupr1567g00001 323 Gene3D - 27 79 - -
Mupr1567g00001 323 SMART sant 79 127 IPR001005 -
Mupr1567g00001 323 SMART sant 26 76 IPR001005 -
Mupr1567g00001 323 CDD SANT 29 74 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1567g00001 Mupr-Chr1567 14357 15931 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1567g00001 22 318 MYB Transcription Factor Family AT1G68320 45.333 2.53e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr1567g00001 Myb_DNA-binding 2.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1567g00001 K09422 - gmx:778042 548.895