Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15678g00001 ATGGTGTCGTTGAAGCTTCAGAAGCGGCTGGCCGCTAGCGTGCTAAAGTGCGGCAGGGGCAAGGTTTGGCTCGATCCCAACGAAGTCAATGAAATCTCCATGGCCAATTCTCGACAAAACATAAGGAAGTTGGTTAAGGATGGGTTTATTATCAAGAAACCAACTAAGATTCACTCTCGCTCTCGTGCTCGTCGAATGAAGGAGGCCAAGAGGAAGGGTCGTCACTCCGGATATGGTAAGCGTAAGGGTACAAGGGAGGCAAGGCTTCCCACCAAAATCCTTTGGATGAGGAGGTTGCGTGTCCTCAGACGCTTGCTTCGCAAGTACAGGGAATCAAAGAAGATTGACAAGCACATGTACCATGATATGTACATGAAGGTGAAAGGTAATGTTTTCAAAAATAAGAGAGTCCTAATGGAGAGCATACACAAGTCCAAGGCAGAGAAGGCAAGAGAAAAGACCTTGTCTGATCAGTTCGAGGCGAAGCGGGCAAAGAACAAGGCTAGCAGGGAGAGGAAAATTGCTCGGAGGGAGGAGCGCTTTGCCCAAGGTCCAGGGGAGAAGCCATCAGCAGCACCAGCTGCTACACCTGCAACAGCATCCCAGCCAAGCACCGAAGAAATCCAAGAAGTGAGTCACATATACAGAGATTTGGTGGATGGCGGCTCTTTATCAAAGCTGGCATCTTCAGTTACTGTGCTCAAGTCTGACAGTGCAGCTGCAACAACCTCTGAGGTTCCAAATTTTCACGATTCATTCAATTTGAGTAGCCTGTGGCTGATGTTTTTGGAGATGACACTTATCAGTCTCGTATAA 816 0.4816 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRLRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREERFAQGPGEKPSAAPAATPATASQPSTEEIQEVSHIYRDLVDGGSLSKLASSVTVLKSDSAAATTSEVPNFHDSFNLSSLWLMFLEMTLISLV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15678g00001 271 MobiDBLite consensus disorder prediction 144 206 - -
Mupr15678g00001 271 MobiDBLite consensus disorder prediction 56 79 - -
Mupr15678g00001 271 Gene3D - 57 188 - -
Mupr15678g00001 271 Pfam Ribosomal protein L19e 4 145 IPR000196 GO:0003735|GO:0005840|GO:0006412
Mupr15678g00001 271 SUPERFAMILY Ribosomal protein L19 (L19e) 3 144 IPR035970 GO:0003735|GO:0005840|GO:0006412
Mupr15678g00001 271 FunFam Ribosomal protein L19 1 56 - -
Mupr15678g00001 271 Gene3D - 2 56 IPR015972 GO:0003735|GO:0005840|GO:0006412
Mupr15678g00001 271 MobiDBLite consensus disorder prediction 144 184 - -
Mupr15678g00001 271 CDD Ribosomal_L19e_E 4 167 IPR033935 GO:0003735|GO:0022625
Mupr15678g00001 271 PANTHER 60S RIBOSOMAL PROTEIN L19 1 188 IPR039547 GO:0003723|GO:0003735|GO:0022625
Mupr15678g00001 271 MobiDBLite consensus disorder prediction 56 85 - -
Mupr15678g00001 271 FunFam Ribosomal protein L19 57 192 - -
Mupr15678g00001 271 SMART Ribosomal_L19e_2 3 146 IPR000196 GO:0003735|GO:0005840|GO:0006412
Mupr15678g00001 271 Hamap 50S ribosomal protein L19e [rpl19e]. 3 149 IPR000196 GO:0003735|GO:0005840|GO:0006412
Mupr15678g00001 271 ProSitePatterns Ribosomal protein L19e signature. 7 26 IPR023638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15678g00001 Mupr-Chr15678 4196 6476 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15678g00001 1 197 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 86.294 2.14e-124 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15678g00001 K02885 - gmx:100527501 372.474