Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15676g00001 ATGAACGGGAAGGCCAACGTCTCCAAGGAGCTCAACGCCAAGCACAAGAAGATACTGGAAGGACTTCTTAAATTACCAGAGAATAGGGAATGTGCTGACTGCAAAGCTAAAGGTCCAAGATGGGCTAGTGTAAATCTTGGCATCTTTATATGTATGCAGTGTTCAGGAATACATCGAAGTTTGGGGGTACATATATCAAAGGTTCGTTCTGCAACCCTGGACACTTGGCTTCCAGAGCAAGTTGCATTCATTCAATCGATGGGAAATGAGAAAGCAAATAGTTACTGGGAAGCAGAATTACCTCCAAATTATGATAGAGTTGGAATTGAGAATTTCATTCGTGCAAAGTATGAGGAGAAAAGATGGCTTCCAAGAGATGGGAATTCAAAAACACCTTCTGGATTGCGGGAGGAGAAAAGTCCTTCACGTTGGCAGAGGCCTGTGGAGAGAAGTGGTTATGCTGCTGTTTCTGATAATACTTTTGAGGAAAGGAAGAAAATTCAACCATCAAATACAATTCCTGCTACAAGAATTAGTGTTCCTGCTCCTCACAGAGCGCCTGAGCAGGTAACTCCTATTACCAAACCTCAGCATGTTGAGAAAGTGGAACCAGTAGCACCACAACCACAAGCTGAAACTTCAAAGCAGGCTATGGACACAGCTCAAAACACCCCTTCAAAAGTTGACTATGCCACAGACCTTTTCAACATGTTGTCTATGGATGTTCCCAATGATAATTGTTCTGAGACAGCTGGTACAACTACTGATGATAATCACTGGGCAGCTGCTGCAGAGGTGTCAACAGCTGATAAGACTAGTCCACTGAAAGCAGCTGATAGTACTCTGCCATCTGCAATTGGAATTGAGGATCTTTTCAAAGATTCACTTTCTGTGACACCAAGCTTAGCCCCAGAAAAACCACAGAAGGATGTGAAAAATGATATAATGAGCCTCTTTGAGAAGGGCAATATGGTGTCTCCATTTTCTATGCATCAACAGCAGCTTGCCATGCTGGCACAGCAACAGTCTCTTCTAATGGCTGCTGCAGCTAAATCTACTGGTGGGGATCCCAGGTATCCTGCTAGCATACAACAACCTAGACCTGTTGTTCCTATACAAAGTTGGCCAGCTACTGGCTACCCGATTTCTGGAGTAATGCACATGGGTGGTCAGGGAGAGCTGCAAAAACTTATGCAGGGTCAGACTAGGAACATGACCCCAGCACATTTAGCAGGGAGCTCTGTTCAATATCCACCATCCAGTTTCTATGCTATGGGACAAGTTCCTCCAGTTAACGGTATGATGGGAGTGAATAAACCTCAGTCAGCAGCTCCAGTGTCATCTACCTCTTCACAGTCTGCGAAGGATTATGATTTTTCCTCCTTAACACAGGGGATGTTTGCGAAACAGTGA 1413 0.4444 MNGKANVSKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEEKRWLPRDGNSKTPSGLREEKSPSRWQRPVERSGYAAVSDNTFEERKKIQPSNTIPATRISVPAPHRAPEQVTPITKPQHVEKVEPVAPQPQAETSKQAMDTAQNTPSKVDYATDLFNMLSMDVPNDNCSETAGTTTDDNHWAAAAEVSTADKTSPLKAADSTLPSAIGIEDLFKDSLSVTPSLAPEKPQKDVKNDIMSLFEKGNMVSPFSMHQQQLAMLAQQQSLLMAAAAKSTGGDPRYPASIQQPRPVVPIQSWPATGYPISGVMHMGGQGELQKLMQGQTRNMTPAHLAGSSVQYPPSSFYAMGQVPPVNGMMGVNKPQSAAPVSSTSSQSAKDYDFSSLTQGMFAKQ 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15676g00001 470 CDD ArfGap 19 117 - -
Mupr15676g00001 470 MobiDBLite consensus disorder prediction 441 456 - -
Mupr15676g00001 470 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 470 IPR044520 GO:0005096
Mupr15676g00001 470 Gene3D Arf GTPase activating protein 2 130 IPR038508 -
Mupr15676g00001 470 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Mupr15676g00001 470 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Mupr15676g00001 470 MobiDBLite consensus disorder prediction 124 145 - -
Mupr15676g00001 470 FunFam stromal membrane-associated protein 1 isoform X1 1 128 - -
Mupr15676g00001 470 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Mupr15676g00001 470 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Mupr15676g00001 470 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Mupr15676g00001 470 MobiDBLite consensus disorder prediction 124 173 - -
Mupr15676g00001 470 MobiDBLite consensus disorder prediction 436 456 - -
Mupr15676g00001 470 Pfam Putative GTPase activating protein for Arf 17 123 IPR001164 GO:0005096
Mupr15676g00001 470 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15676g00001 Mupr-Chr15676 1898 7376 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15676g00001 16 123 C2H2 Transcription Factor Family AT4G05330 50.000 2.31e-30 119