Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1565g00001 ATGGACCAACCTAACATTACAATGCTAATATTCACAACCATAGCATTGTTGCTATCACGCGCCGAGGCCGTGCGGAAGTGTGGGAATTGCGGTCCAAACCCGGTTCCGTACCCACTAAGCACGGGACCCGATTGTGGCGACCCGTGGTACAAGATCCGGTGCACCGCTGGTACACTTTGGCTGGATGCACTCGCCGGATCATCCTACATGATCAGGTCCATTGACCCTTTAATCCGTCGGATCATAACCCGACCCGCCACGCTCGCACCGAAGACGTGCGTGTCCACGGATTTCCGCAGCGAAGGCATCCACCTGAACGAGACCCTTCCTTTTAGCGTGGCTTCAGGCAACACCATATTTTTCTTCAACTGCACCACCTCCAACGCGCCTTCGATGAACTGCTCCGCAAGCAGCGCATGCCACAGCTACACTACGGACCAAGCAGATTTCGGCGCGTGCAGACGCGTGGGATTGTGCTGTGAGTACAAGAGTGGTGGGGCCCGCAAAGAGTACGTGGTTCGGGTGCACGGCGGAGCGTGCGCGGCGTATCAGAGTTTTGTGGATTTTAACGGCACGGCGGGAAAGCGGTGGCCGGAGCCTGGGGTGGGAATCGAGTGGGTGGCACCACAGGAACCTGTTTGTAGGGCGCCAATTGATTGCAATGAATTGGTGAACTCGAAGTGTGGAGTGGGCCCGGGTGGTGGGGTGCAAAGGTGCTTCTGCAATGCTGGTTTTAAGTGGGACCCAATCAATGGTTTGTGTCAGCCTCAAATTATTCAGAATACAACAAAGTGCACAGGACATGGAAAAGACAGCCACTGCAAAGTTCGGAAGAAAAAGAAAATGCTTCTTGCTGTGGTTGTTTCCTTGGTTGGAATGGTCTCCATTACGACAGTTATAGTAGTGATTTTCTTGAAGAAGCATAATGAAGCAAAGGAGGCCAAAAGCAAAAGTAGGAAAGAAATCTCAAGTGCGAAAGCGAGTGCATTATCATCCAGAATCTTCACCGGCAGAGAGATAAAAAAAGCAACGAACAACTTCTCACAAGAAAACCTGGTTGGCTCTGGCGGCTTCGGGGAAGTCTTCAAGGGAACATTCGATGACGGAACCGTCTTCGCCATTAAACGAGCCAAGCTGGGAAGCACCAAAGGCATCGACCAAATGCAAAATGAGGTTCGAATTCTCTGCCAAGTAAACCATAGAAGCCTGGTGAAACTCCTCGGTTGTTGCTTGGAACTCGAACACCCTTTGCTAATCTATGAGTTCGTTTCAAACGGAACCCTTTTCGATTACCTTCACCGCCACGCAAGGGAACCCCTCAAGTGGCTCCAAAGACTCAAAATTGCGCACCAAACAGCCGAAGGGCTTTCGTATCTGCACTCTTCCGCCGTGCCGCCAATTTACCACCGTGACGTGAAATCGAGCAACATTCTTCTTGATGACAAGCTTGATGCCAAGGTTTCCGACTTTGGACTATCTAGGCTTGTTGAATTGGCTGAGGAGAACAAGAGTCATATTTTCACCAGTGCGCAAGGGACACTTGGGTATCTTGACCCGGACTATTACCGGAACTTTCAGTTGACCGATAAGAGTGATGTTTATAGCTTTGGAGTGGTGTTGATGGAGCTGCTTACTGCTCAGAAAGCTATTGATTTCAATAGGGAGGAAGAGAGTGTTAACTTGGCCATGTATGGGAGGAAGAAGATGCTTGAGGACAAGTTGATGGATGTGCTTGATCCTTTGCTTAAAGAGGGAGCTAGTGATTTGGAATTGGAAACTATGAAGTCGTTAGGATATCTTGCAGCTGCGTGCTTGGATGAACAGAGGCAAAAACGGCCTTCCATGAAAGAAGTTGCTGATGAGATTGAATACCTCATTAAAATTGTTAAGGGTCAGAACCCGAGTTATAACAACACACTCTATGTTCATCTCTTTTTAATAGATTCTCTCCTCATGGTTGAAATTCTCGTGTTTTCTTTGCCTTTTGGAAATGAGCTGAGATCCTTCAAACGAGAAATGAGACTCCTGTCTACATAA 2037 0.487 MDQPNITMLIFTTIALLLSRAEAVRKCGNCGPNPVPYPLSTGPDCGDPWYKIRCTAGTLWLDALAGSSYMIRSIDPLIRRIITRPATLAPKTCVSTDFRSEGIHLNETLPFSVASGNTIFFFNCTTSNAPSMNCSASSACHSYTTDQADFGACRRVGLCCEYKSGGARKEYVVRVHGGACAAYQSFVDFNGTAGKRWPEPGVGIEWVAPQEPVCRAPIDCNELVNSKCGVGPGGGVQRCFCNAGFKWDPINGLCQPQIIQNTTKCTGHGKDSHCKVRKKKKMLLAVVVSLVGMVSITTVIVVIFLKKHNEAKEAKSKSRKEISSAKASALSSRIFTGREIKKATNNFSQENLVGSGGFGEVFKGTFDDGTVFAIKRAKLGSTKGIDQMQNEVRILCQVNHRSLVKLLGCCLELEHPLLIYEFVSNGTLFDYLHRHAREPLKWLQRLKIAHQTAEGLSYLHSSAVPPIYHRDVKSSNILLDDKLDAKVSDFGLSRLVELAEENKSHIFTSAQGTLGYLDPDYYRNFQLTDKSDVYSFGVVLMELLTAQKAIDFNREEESVNLAMYGRKKMLEDKLMDVLDPLLKEGASDLELETMKSLGYLAAACLDEQRQKRPSMKEVADEIEYLIKIVKGQNPSYNNTLYVHLFLIDSLLMVEILVFSLPFGNELRSFKREMRLLST 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1565g00001 678 SMART serkin_6 347 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1565g00001 678 ProSiteProfiles Protein kinase domain profile. 347 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1565g00001 678 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Mupr1565g00001 678 FunFam Wall-associated receptor kinase-like 20 423 635 - -
Mupr1565g00001 678 FunFam Wall-associated receptor kinase-like 20 309 422 - -
Mupr1565g00001 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Mupr1565g00001 678 Gene3D Phosphorylase Kinase; domain 1 306 422 - -
Mupr1565g00001 678 Pfam Protein tyrosine and serine/threonine kinase 350 621 IPR001245 GO:0004672|GO:0006468
Mupr1565g00001 678 SUPERFAMILY Protein kinase-like (PK-like) 321 621 IPR011009 -
Mupr1565g00001 678 Gene3D Transferase(Phosphotransferase) domain 1 423 639 - -
Mupr1565g00001 678 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 25 625 IPR045274 GO:0007166
Mupr1565g00001 678 CDD STKc_IRAK 353 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1565g00001 Mupr-Chr1565 17368 21438 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1565g00001 26 629 Receptor kinase-like Gene Family AT5G02070 54.880 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mupr1565g00001 PK_Tyr_Ser-Thr 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1565g00001 - - aprc:113862410 1034.25