Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15646g00004 ATGGGGAAATCAGGGGGTAGAAGAAAGAAGGGTGGTTCAAACCCTAACCAAGGTGGCGTTGATAATTCGGGTTCAAGTGCCGCAGCCCCAACGGCTAACGGTGGGGCGGAGTTGTTGGATTCGTCGATATTTTTGAAGAAGGCGAATGAGCTGAAAGAAGAAGGGAATAGGAGGTTCCAGAATAAGGACTATGCGGGTGCTCTTGAACAGTACGAGAGTGCTCTTCGACTAACCCCCAAAACGCACCCTGACAGAGCCGTTTTTCACAGCAACAGGGCTGCGTGTTTGATTCAGATGAAGCCCATCGATTACGAAGCTGTCATTGCTGAGTGCACCATGGCACTTCAGGTCCAGCCCCGCTTTGTCCGGGCCCTTCTTCGCAGGGCCCGGGCTTTCGAGGCCGTTGGCAAGTATGAAATGGCTGTGCAAGATGTGCAGTTATTGTTGGCAGCTGATCCTAGTAACCGCGATGCTTTGGATATTGCTCAGAGATTGAGGACTGCATTGGGGCCACGCCAGGAAGCTCAGCAGGACCTCCACAGTCGCCCCTCCCCTGCTGCCCTTGGTGCATCTGCTGTTCGTGGTGCTCCTATTGCTGGATTAGGGCCGTGTTTGCCAGCCCGGCCTGTGGCAAAGAAGGGAGCAAATTCGGTGGTTGGATCTGTTGTGTTGCCCAATAATAACAAGCTTGACAAGTCCCAGCCAGTTTTGCCTACTGAGAATGGTCCCGACATGAAGTCCCAGTTGCCAAAACTGGTTTTGAAGTCTTCAAGTGGTTCTGCAAAGACATCTAATCCTAAAAAGGAAGACCGCAAGGAACATTCATCAACCATTCACGGGCAGAGTTCTGGGGTTTTTATTCAGTGGAGACCTTTGAAGCTTGTTTATGATCATGATATTAGGCTCTCCCAGATGCCTGTCAATTGCAGTTTTAGAGTACTAAGAGATTTAGTAAGCAAAAGATTTCCTTCGTCGAGTTCAGTTCTGATCAAGTATAAGGATTGCGATGGTGATTTGGTTACTATAACCTCTACTGATGAACTAAGACTGGCAGAGTCTAGTGTTGACAGCCTTCTCCTGAGAGAACCTGGGGAAGAAAAAAGTGATTCTGTTGCAATGCTGAGACTGCATATTGTTGAAGTTAGTCCGGAGCAGGAGCCACCTTTATTGGAAGAAGAGGAAGAAAAACCAGTTGAGAATGAAGGAATCAAGGGAGAAGAGAGTGGATCTCATTCTTCCCTTGGCGAATCTGTCTCTGAAATTGCTGATACCGAGGTTGATAAGATGGGGAAGGATGCTCCAAAGGAAAAGCCAGGAGCCACTGGAGATACTGAATGCAAAGAAGTGGAGATGGATGATTGGTTGTTTGAGTTCGCTCAGCTTTTCCGCTCACATGTTGGTATTGATCCAGATGCTCATATTGACTTGCATGAGCTTGGGATGGAGCTTTGTTCTGAGGCACTTGAGGAAACAGTAACTAGTGAGGAGGCTCAGGATCTATTTGACAAGGCGGCTTCAAAGTTTCAGGAGGTGGCTGCTTTGGCTTTCTTCAACTGGGGTAATGTTCACATGTGTGCGGCTAGGAAGCGGATCCCCCTGGATGAGTCAGCTGGCAAGGAGGTAGTGACAGTGCAGCTTCAAGTGGCTTATGAGTGGGTCAAGGAAAAGTATTCTTTGGCAAGAGAGAAGTATGAGGAAGCACTCTCGATCAAACCAGACTTTTATGAGGGACTGTTGGCTCTGGGGCAGCAACAATTTGAAATGGCTAAACTTCATTGGTCTTTTGCACTTGCTAAGAAGATAGATCTATCAGGCTGGGATTCTAAGGAGACACTTGAACTTTTTGACAGTGCAGAGGAGAAGATGAAAGCTGCTACAGATATGTGGGAGAAACTGGAGGAACAGAGAGCAAAAGAGCTAAAGGACCCAAATGCAACCAAGAAAGAAGAATTATTGAGAAGAAGAAAGAAACAAGGTGGTGCTACTGAAGGTGAATCCTCCAGTGTTGGAGGTCAGGGTGATATATCTGCAGAAGAAGCTGCTGAGCAAGCAGCTGTCATGAGATCACAAATTCACCTCTTCTGGGGTAATATGCTTTTCGAAAGATCCCAAGTTGAATGCAAATTGGGAATGAGTGGATGGAAGGAAAACCTGGATGCTGCAACTGAACGCTTTAAGCTTGCAGGAGCTTCCGAGGCAGATATTTCTATGGTTCTAAAGAATCATTGCTCAAATGGAGAAGCAAAAGATGGAGATGATAAAAAGGTTGACAACCCACAGCACAAGACTGTTAAATCAGAGATCAATAAGGCTAATCAATCTGGAGTTTTACTGTCAAATGTTGGAGGAGATTCTGGCATATTATTCCCATGCTCACTGGGATCTGGCCAGAGTTTAAAGAATCTGTGTCCTATAAGATCTCCTATTGAGCTTATCTAA 2439 0.4654 MGKSGGRRKKGGSNPNQGGVDNSGSSAAAPTANGGAELLDSSIFLKKANELKEEGNRRFQNKDYAGALEQYESALRLTPKTHPDRAVFHSNRAACLIQMKPIDYEAVIAECTMALQVQPRFVRALLRRARAFEAVGKYEMAVQDVQLLLAADPSNRDALDIAQRLRTALGPRQEAQQDLHSRPSPAALGASAVRGAPIAGLGPCLPARPVAKKGANSVVGSVVLPNNNKLDKSQPVLPTENGPDMKSQLPKLVLKSSSGSAKTSNPKKEDRKEHSSTIHGQSSGVFIQWRPLKLVYDHDIRLSQMPVNCSFRVLRDLVSKRFPSSSSVLIKYKDCDGDLVTITSTDELRLAESSVDSLLLREPGEEKSDSVAMLRLHIVEVSPEQEPPLLEEEEEKPVENEGIKGEESGSHSSLGESVSEIADTEVDKMGKDAPKEKPGATGDTECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQDLFDKAASKFQEVAALAFFNWGNVHMCAARKRIPLDESAGKEVVTVQLQVAYEWVKEKYSLAREKYEEALSIKPDFYEGLLALGQQQFEMAKLHWSFALAKKIDLSGWDSKETLELFDSAEEKMKAATDMWEKLEEQRAKELKDPNATKKEELLRRRKKQGGATEGESSSVGGQGDISAEEAAEQAAVMRSQIHLFWGNMLFERSQVECKLGMSGWKENLDAATERFKLAGASEADISMVLKNHCSNGEAKDGDDKKVDNPQHKTVKSEINKANQSGVLLSNVGGDSGILFPCSLGSGQSLKNLCPIRSPIELI 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15646g00004 812 ProSiteProfiles PB1 domain profile. 289 381 IPR000270 GO:0005515
Mupr15646g00004 812 MobiDBLite consensus disorder prediction 635 675 - -
Mupr15646g00004 812 CDD PB1 292 359 - -
Mupr15646g00004 812 SUPERFAMILY CAD & PB1 domains 286 360 - -
Mupr15646g00004 812 Gene3D - 291 360 - -
Mupr15646g00004 812 Gene3D Tetratricopeptide repeat domain 485 665 IPR011990 GO:0005515
Mupr15646g00004 812 MobiDBLite consensus disorder prediction 421 446 - -
Mupr15646g00004 812 MobiDBLite consensus disorder prediction 15 30 - -
Mupr15646g00004 812 MobiDBLite consensus disorder prediction 383 446 - -
Mupr15646g00004 812 Pfam PB1 domain 289 380 IPR000270 GO:0005515
Mupr15646g00004 812 MobiDBLite consensus disorder prediction 635 661 - -
Mupr15646g00004 812 SMART tpr_5 86 121 IPR019734 GO:0005515
Mupr15646g00004 812 SMART tpr_5 48 81 IPR019734 GO:0005515
Mupr15646g00004 812 SMART tpr_5 541 574 IPR019734 GO:0005515
Mupr15646g00004 812 SMART tpr_5 122 155 IPR019734 GO:0005515
Mupr15646g00004 812 ProSiteProfiles TPR repeat profile. 122 155 IPR019734 GO:0005515
Mupr15646g00004 812 MobiDBLite consensus disorder prediction 1 33 - -
Mupr15646g00004 812 MobiDBLite consensus disorder prediction 225 279 - -
Mupr15646g00004 812 Gene3D Tetratricopeptide repeat domain 40 181 IPR011990 GO:0005515
Mupr15646g00004 812 SUPERFAMILY TPR-like 466 591 IPR011990 GO:0005515
Mupr15646g00004 812 ProSiteProfiles TPR repeat profile. 48 81 IPR019734 GO:0005515
Mupr15646g00004 812 SUPERFAMILY TPR-like 45 179 IPR011990 GO:0005515
Mupr15646g00004 812 PANTHER PROTEIN CLMP1 1 769 IPR044517 -
Mupr15646g00004 812 SMART PB1_new 289 381 IPR000270 GO:0005515
Mupr15646g00004 812 Coils Coil 615 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15646g00004 Mupr-Chr15646 19741 23502 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15646g00004 45 169 Calmodulin-binding Proteins AT3G25230 28.676 5.90e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15646g00004 K26538 - gmx:100786963 1349.34