Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1563g00004 ATGTCGAGCATGAATTCACCAACACCACATTTTGTTTCCTCGAGAAGGATGAGTGTGTATGATCCTATCCACCAGATTAGTATGTGGGGAGAAGGCTTCAAAAGTAATGGTAATTTAAGTACATCCATGCCTTTAATTGATGAGGAAGACATGAAGCTAGATAGTCAGTCAGAAGATGTTTCTCATGGTATATTGGGAGCATCTAATAAGTATGATCAAGAAGCTAACAAACCTGATAAGGTACAAAGACGTCTTGCACAAAATCGAGAGGCTGCTCGTAAGAGTCGTTTGAGAAAAAAGGCATATGTGCAACAGTTAGAATCTAGTCGTTTGAAGTTAATGCAATTGGAGCAAGAGCTTGAACGTGCAAGACAACAGGGAATGTATATAGGTGGTGGGTTAGATTCTAATCATTTGGGTTTTGATGGATCTATAAATTCAGGAATTACAACCTTTGAAATGGAGTATGGAAACTGGGTGAATGAGCAAAATATACAAATCACAGAGCTGAGAAGTGCTTTAAATGCTCATATTGGAGACATAGAGCTTAGGATTCTAGTAGATAGTATGATGAACCACTATATTGAAATCTTTCGCATGAAATCTACTGCTGCGAAAGCAGATGTTTTCTATGTTATGTCTGGCATGTGGAAAACAACAGCTGAAAGATTTTTCTTGTGGATCGGAGGCTTTCGCCCCTCTGAGCTCTTAAAGGTTCTTGGTCCCTTAATTGAACCATTGACAGAGCAACAACGGTTGGATATCTATAACCTTGGACAATCATGTCAACAAGCAGAAGATGCTCTTTCACAAGGTATGGACAAACTCCGACAAACACTTGCTGATAGTGTAGCAGCTGGACAATTCATGGAAGGAACTTATATTCCACAAATGACTTCTGCAATGGAGAAGTTGGAAGCTTTGGTGAGCTTTGTGAACCAGGCTGATCATCTTCGACAAGAAACCTTGCAGCAAATGACTCGAATACTTACAATTCGTCAAGCAGCTCGATGCTTGCTTGCTTTAGGGGAATATTTTCAACGCCTAAGGGCTTTGAGCACACTATGGTCTAATAGACCTCTTTTGCATAATGGAGAAGTTGTAAATACGACTGCTCGCTCATTTTATGCATATGAGTTTTTTGATGAACCATTTGTAGTTAGTAGGATATATAATCATCATGATTCCACGTGGAATCTCAATTACAACTTGGATATGACATAG 1224 0.393 MSSMNSPTPHFVSSRRMSVYDPIHQISMWGEGFKSNGNLSTSMPLIDEEDMKLDSQSEDVSHGILGASNKYDQEANKPDKVQRRLAQNREAARKSRLRKKAYVQQLESSRLKLMQLEQELERARQQGMYIGGGLDSNHLGFDGSINSGITTFEMEYGNWVNEQNIQITELRSALNAHIGDIELRILVDSMMNHYIEIFRMKSTAAKADVFYVMSGMWKTTAERFFLWIGGFRPSELLKVLGPLIEPLTEQQRLDIYNLGQSCQQAEDALSQGMDKLRQTLADSVAAGQFMEGTYIPQMTSAMEKLEALVSFVNQADHLRQETLQQMTRILTIRQAARCLLALGEYFQRLRALSTLWSNRPLLHNGEVVNTTARSFYAYEFFDEPFVVSRIYNHHDSTWNLNYNLDMT 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1563g00004 407 Gene3D - 79 128 - -
Mupr1563g00004 407 Pfam Seed dormancy control 166 240 IPR025422 GO:0006351|GO:0043565
Mupr1563g00004 407 ProSiteProfiles DOG1 domain profile. 149 359 IPR025422 GO:0006351|GO:0043565
Mupr1563g00004 407 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 78 122 IPR004827 GO:0003700|GO:0006355
Mupr1563g00004 407 PANTHER TRANSCRIPTION FACTOR TGA9 6 360 - -
Mupr1563g00004 407 CDD bZIP_HBP1b-like 80 132 - -
Mupr1563g00004 407 SMART brlzneu 76 136 IPR004827 GO:0003700|GO:0006355
Mupr1563g00004 407 Pfam bZIP transcription factor 77 114 IPR004827 GO:0003700|GO:0006355
Mupr1563g00004 407 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 83 98 IPR004827 GO:0003700|GO:0006355
Mupr1563g00004 407 Coils Coil 99 126 - -
Mupr1563g00004 407 FunFam BZIP family transcription factor 79 128 - -
Mupr1563g00004 407 SUPERFAMILY Leucine zipper domain 80 122 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1563g00004 Mupr-Chr1563 38001 43165 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1563g00004 4 359 Calmodulin-binding Proteins AT5G65210 69.146 0.0 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mupr1563g00004 DOG1 1.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1563g00004 K14431 - gmx:100793353 648.662