Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1563g00001 ATGACATCTGTGTCTAAGGTCTTGAAAAAGAAACGAAGGTCATTGCGTCCAATTAGCACCCAGCAATACCTGAAATTCATCGAAAAGAAGAATCCAACGATTTGCTACAGCAAAAGAAGATTGAAGGCAAAGAACGCAGAGTGTAGGGTGTGTTTGTCGGAATTCGAGGAAGGGGAGAAAGTGAGGAAATTGAAATGCCAACACACATTTCATAGGGATTGCTTGGACAAGTGGTTGCAACAATACTGGGCAACGTGCCCACTTTGTAGGAAACAAGTGGTGCCGCATGATGTTGTGTTCAAACATCGTCAGCATCAAAATCAAACAGAGGCTGCTTTTAATGGGAACGATCAACAAATTCCCCTTCTTTTAACTGCGTTTCACGGTGGCAACACTTTGCACAGATATCTCTAA 414 0.4275 MTSVSKVLKKKRRSLRPISTQQYLKFIEKKNPTICYSKRRLKAKNAECRVCLSEFEEGEKVRKLKCQHTFHRDCLDKWLQQYWATCPLCRKQVVPHDVVFKHRQHQNQTEAAFNGNDQQIPLLLTAFHGGNTLHRYL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1563g00001 137 ProSiteProfiles Zinc finger RING-type profile. 48 90 IPR001841 -
Mupr1563g00001 137 SUPERFAMILY RING/U-box 36 96 - -
Mupr1563g00001 137 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 96 IPR013083 -
Mupr1563g00001 137 SMART ring_2 48 89 IPR001841 -
Mupr1563g00001 137 Pfam Ring finger domain 47 90 IPR001841 -
Mupr1563g00001 137 PANTHER - 7 132 - -
Mupr1563g00001 137 FunFam Putative RING zinc finger domain superfamily protein 18 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1563g00001 Mupr-Chr1563 1058 1534 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1563g00001 46 101 C3H Transcription Factor Family AT1G15100 55.357 2.20e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1563g00001 K16282 - gmx:102668078 207.223