Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15629g00001 ATGGTTGGAAGAGAAAAAGAGTTATGTTCTAGAAGGGAGATGGAGAATGATATGGAGGGTGTGCAGTGGTGCAACATATGCTCAAAGATGGTGAATCCAGTAAATGATGCTGAGAACATATGCCCCTTTTGTGAGACAGAGTTTTCTGAGGTAATAGACAACCTAAGGGACCAGAATGATGTTATTGACTTAAGGTCAGCTTGGGTGTTTTCACTTTATGCCCCAATTTTTCTTGGTTTGATGGGTGCTTTCAGCCCTTCTCTAGCAAGAATTGCTTCACAAGGAGGTGGGAGCAGCTCAAGGGGGGAGGAGGAAGAGGTTGAGCAAGAGAGGGAGAATGAGCTTGTGCTTGGGAGAAGGAGAAGAACTTCAACTTACATGATGCATCTCTTCCGAGGTCTTCATGTGAGGATGGTGTCTGAGTTTGAAAACCTTGAAGACAATAGGAACATAGATAACAGCAGCATACTTGTGATTGATCCATTCAATGAAGGTGCATTGATTGTGAGAGGCCCTAACTTGAGCCACACAAGTGGTCCAAATGAGAACAATATTGTTGGCAGCTCCTTGAATGACCTTGTGGTGGGATCTGGCTTTGATTTGTTGCTGCAGCATTTGGCACAGATTGGCCCTGGTGGGTATGCAAGTGTGAACCCTCCAGCACAGAAAGCAGCAATTGAAGCAATGCCTAGTGTGATCAGTGAGGAAAAGTTGCAGTGCACAGTGTGCTTGGAGGATGTTGAGATTGGGAGTAATGCCAAGGAGATGCCATGTAAGCATAAGTTCCATGATGACTGCATTGTCTCATGGCTGAAGCTTCATGGCTCTTGTCCAGTTTGCAGGTTCCAGATGCCATCTGAGGATTCAAATGTTGTTGAAGCCAATATGGATATTGGAAATGGAGACATTCAGAACACTGAGCTAGCCAGAGCTGGAGAAGAGAGACCAAGAAATGGAAGGAGGAATTGGTTTCCAGTGCTGCAATCATTTAACAACTTTCTTCCTTCTCCCTGA 1014 0.4497 MVGREKELCSRREMENDMEGVQWCNICSKMVNPVNDAENICPFCETEFSEVIDNLRDQNDVIDLRSAWVFSLYAPIFLGLMGAFSPSLARIASQGGGSSSRGEEEEVEQERENELVLGRRRRTSTYMMHLFRGLHVRMVSEFENLEDNRNIDNSSILVIDPFNEGALIVRGPNLSHTSGPNENNIVGSSLNDLVVGSGFDLLLQHLAQIGPGGYASVNPPAQKAAIEAMPSVISEEKLQCTVCLEDVEIGSNAKEMPCKHKFHDDCIVSWLKLHGSCPVCRFQMPSEDSNVVEANMDIGNGDIQNTELARAGEERPRNGRRNWFPVLQSFNNFLPSP 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15629g00001 337 FunFam E3 ubiquitin-protein ligase RNF181 212 287 - -
Mupr15629g00001 337 ProSiteProfiles Zinc finger RING-type profile. 240 281 IPR001841 -
Mupr15629g00001 337 MobiDBLite consensus disorder prediction 92 114 - -
Mupr15629g00001 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 214 287 IPR013083 -
Mupr15629g00001 337 SMART ring_2 240 280 IPR001841 -
Mupr15629g00001 337 SUPERFAMILY RING/U-box 228 286 - -
Mupr15629g00001 337 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 123 285 - -
Mupr15629g00001 337 Pfam Ring finger domain 239 281 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15629g00001 Mupr-Chr15629 1069 2500 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15629g00001 104 297 C3H Transcription Factor Family AT1G26800 31.472 1.99e-23 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15629g00001 - K11982 gmx:100790855 564.303