Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15626g00001 ATGCATCGCTGCTGCAGTGGCTCCCAGGGGCACGTGATGGGACCCTGTACATGTGGTATGTTTCACAGCCAAACCACTTCCTTCTCCATGCTCTTCTCCATGCCCAACCACAAACCACCCTATGACGAATCCAACATCTATGACTATTCCTTCCCTCCCTCTTCCTCCTCTTCCTCCTCCTCTGTCGATTGCACTCTCTCCCTCGGTACCCCATCCACCCGTTTCACCGAAGATGAAGAAAAAAGAACCCGCCACGAACGTCGTTCCGTCTCTAATTTTTGCTGGGATTTACTACAATCCAAACACAACCCTCAATCCCAAACCAAGTCCTCCCGAACCACCAATACAACCGACCCTCTCCTCGCTCGTCGCTGTGCCAATTGTGACACCACTTCAACTCCCCTTTGGAGAAATGGCCCCCGAGGCCCAAAGTCGCTGTGCAATGCGTGCGGGATTAGATTCAAGAAGGAAGAGAGAAGAGCGAGTGCCGCCGCCGCCACTCCGGCGGTGGCTTCTGGCGGCGGAATGGAATCGGCGCAGGTGTACAGCAACTCGTGGTACGCACACCCGCAGAGTCAGAAGAGTCAGAAGATGCAGTGCTTCTCGCCGGGGATGGAGAACGAGTTCCGTTTCGTGGACGACGGCGATCGAGACTCCGATAACGGCATTCCGTTTCTGTCTTGGAGACTCAACGTGACGGACAGAACGAGCCTCGTTCACGACTTCACGAGATGA 735 0.5497 MHRCCSGSQGHVMGPCTCGMFHSQTTSFSMLFSMPNHKPPYDESNIYDYSFPPSSSSSSSSVDCTLSLGTPSTRFTEDEEKRTRHERRSVSNFCWDLLQSKHNPQSQTKSSRTTNTTDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRASAAAATPAVASGGGMESAQVYSNSWYAHPQSQKSQKMQCFSPGMENEFRFVDDGDRDSDNGIPFLSWRLNVTDRTSLVHDFTR 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15626g00001 244 ProSiteProfiles GATA-type zinc finger domain profile. 119 155 IPR000679 GO:0006355|GO:0043565
Mupr15626g00001 244 Pfam GATA zinc finger 125 159 IPR000679 GO:0006355|GO:0043565
Mupr15626g00001 244 CDD ZnF_GATA 124 156 IPR000679 GO:0006355|GO:0043565
Mupr15626g00001 244 Gene3D - 121 199 IPR013088 GO:0006355|GO:0008270
Mupr15626g00001 244 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 122 162 - -
Mupr15626g00001 244 SMART GATA_3 119 171 IPR000679 GO:0006355|GO:0043565
Mupr15626g00001 244 ProSitePatterns GATA-type zinc finger domain. 125 150 IPR000679 GO:0006355|GO:0043565
Mupr15626g00001 244 PANTHER GATA TRANSCRIPTION FACTOR 18 11 244 IPR044272 GO:0003700|GO:0009908
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15626g00001 Mupr-Chr15626 1301 2231 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15626g00001 17 244 C2C2-Gata Transcription Factor Family AT3G50870 44.863 3.16e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr15626g00001 GATA 5.9e-18 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15626g00001 - - gmx:100790571 411.764