Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1561g00005 ATGGTACTTACTTTCAAGCGCAGGAATGGAGGTCGCAACAAACACGGCCGTGGCCACGTCAAATTCATTCGCTGCTCCAACTGTGGCAAATGCTGTCCTAAGGACAAGGCAATCAAGAGGTTTTTGGTGAGGAACATTGTCGAACAGGCTGCAGTCAGAGATGTGCAGGAAGCCTGTGTCTATGAACAATACACCCTTCCCAAACTTTATGTGAAGATGCAGTATTGTGTTTCCTGTGCTATTCACTCTCACGTCGTGAGGGTTCGATCCCGCACCGATAGGAGGAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCGCGTCCAGCTGGAGTAGGAGCTCCTGCACTCCTCGAAGAATACCTACATTTTCTATTGTTATGA 423 0.5106 MVLTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKREPPQRFIRRRDDAPRPGQPGQAPRPAGVGAPALLEEYLHFLLL 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1561g00005 140 ProSitePatterns Ribosomal protein S26e signature. 75 82 IPR000892 GO:0003735|GO:0005840|GO:0006412
Mupr1561g00005 140 MobiDBLite consensus disorder prediction 89 125 - -
Mupr1561g00005 140 Pfam Ribosomal protein S26e 3 108 IPR000892 GO:0003735|GO:0005840|GO:0006412
Mupr1561g00005 140 PANTHER 40S RIBOSOMAL PROTEIN S26 4 124 IPR000892 GO:0003735|GO:0005840|GO:0006412
Mupr1561g00005 140 Gene3D Ribosomal protein S26e 3 116 IPR038551 -
Mupr1561g00005 140 MobiDBLite consensus disorder prediction 92 112 - -
Mupr1561g00005 140 FunFam 40S ribosomal protein S26 3 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1561g00005 Mupr-Chr1561 37952 39954 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1561g00005 3 118 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 83.621 1.04e-69 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1561g00005 K02976 - gmx:100784958 223.402