Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15611g00001 ATGGGAAGGGCTCCTTGCTGTGACAAAGCCAACGTGAAGAAAGGCCCATGGTCACCTGAAGAAGATGCCAAACTCAAGGCTTATATTGAGCAGCATGGCACTGGTGGCAACTGGATAGCCCTGCCCCAGAAAATAGGCCTTAAGAGATGTGGGAAAAGCTGTCGTCTTAGATGGCTTAATTATCTCCGCCCAAACATCAAACATGGGGGTTTCTCAGAAGAAGAAGACAACATCATCTGCAGCCTCTATGTCAGTATTGGAAGCAGGTGGTCAATTATAGCAGCACAGTTACCAGGGCGCACAGACAATGATATAAAGAACTATTGGAACACTAGGCTGAAGAAGAAGCTACTTGGAAAACAAAGGAAGGAGCAACAAGCTCAAGCTCGCCGAGTCAACAACAACCTGCAGAAGCAAGAAGTGAAAAGAGAAACCGAGAATTTCATAGTGGCTTCTCAAGTCATCAATCAAGTTCCCTATTGGTCTCCAGAGTTTTCTTCTGTGTCCATGCCACTCACCAATATTGCTTCCTTCCAACACTATGGTCTGAACAACCAAACATCTCTCAGGAACTCGATGGTTAACAAACTAGAGGGAATTAGATTTTCCAGCGATCATCATCAGCAACAGCAGACATACACCAATGCATGTGAAATTCCCTCCCAAACAGACCAGGTATTTCCAACCACAATGAACATGGTGAACCACGTGGCCGTGGTGAGTAATGAAAACAATAGCAGCACTTATCATCCATCGAATATATTTCAAGGGTTTGAAGAGTTCCCAAATGATTTTTGTGAACTGGTCTGCGTGAACCCGCAACAAATGGAGGGTTTCAATTATGGAATGGAATCCATGGACATGAGCAATGGTGGTAGCACGAACACGACTTCAACAGAAAGCACTAGTTGGGGTGACATGAGCTCCTTGGTATATTCTCCTTTGGTTTCTGACTATGAAGGTTGCCGACAAGGAATTCCTCAAGATGTTGCTTTCGAAGAGTGCAAGTACTTTGGAATGCAGATGCAATAA 1032 0.4448 MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGKQRKEQQAQARRVNNNLQKQEVKRETENFIVASQVINQVPYWSPEFSSVSMPLTNIASFQHYGLNNQTSLRNSMVNKLEGIRFSSDHHQQQQTYTNACEIPSQTDQVFPTTMNMVNHVAVVSNENNSSTYHPSNIFQGFEEFPNDFCELVCVNPQQMEGFNYGMESMDMSNGGSTNTTSTESTSWGDMSSLVYSPLVSDYEGCRQGIPQDVAFEECKYFGMQMQ 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15611g00001 343 Gene3D - 70 146 - -
Mupr15611g00001 343 FunFam Transcription factor RAX3 7 68 - -
Mupr15611g00001 343 CDD SANT 71 113 IPR001005 -
Mupr15611g00001 343 SMART sant 13 64 IPR001005 -
Mupr15611g00001 343 SMART sant 67 115 IPR001005 -
Mupr15611g00001 343 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Mupr15611g00001 343 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mupr15611g00001 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mupr15611g00001 343 Coils Coil 115 142 - -
Mupr15611g00001 343 CDD SANT 16 62 IPR001005 -
Mupr15611g00001 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Mupr15611g00001 343 Gene3D - 7 68 - -
Mupr15611g00001 343 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mupr15611g00001 343 PANTHER OS09G0431300 PROTEIN 1 275 - -
Mupr15611g00001 343 FunFam Transcription factor RAX3 70 147 - -
Mupr15611g00001 343 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Mupr15611g00001 343 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15611g00001 Mupr-Chr15611 11594 12926 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15611g00001 1 313 MYB Transcription Factor Family AT3G49690 48.318 4.77e-89 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr15611g00001 Myb_DNA-binding 4.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15611g00001 K09422 - gmx:106795158 600.512