Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15610g00003 ATGGGGCATCACTCTTGCTGCAACAAGCAGAAGGTCAAAAGAGGACTATGGTCACCTGAAGAAGATGAAAAGCTCATGAACTACATCACAACTTATGGACACGGTTGCTGGAGCTCAGTCCCAAAACTTGCAGGCCTGCAAAGGTGTGGAAAGAGTTGCAGATTAAGATGGATAAATTATCTAAGACCTGATTTGAAAAGAGGAAGCTTCTCTCCTCAAGAAGCAACACTTATTATAGAACTTCATAGTATTCTAGGCAACAGGTGGGCTCAAATAGCCAAGCACTTACCTGGAAGAACAGATAATGAGGTGAAGAACTTTTGGAATTCAAGCATAAAGAAGAAGCTGCTTTCTCATGATGTTATTCCTTCTTTAGCTACATTTTCTGATATTCACAGTCATTCCAATGGTTCCATGGAAAGTTTCTTCCCTTTAACTAACAACCCTATCCTAAAATCCCATCATCACTTAGACCAGCTATACCTTCCCCTCATCCCATCCCCAATCCTACAAGGGTTTGATCATCATCACAATGACATCAAGATTGATATAAACAATTTCAATAATGCCAATTTCCTACATTTTCATAATCCAATGCAAGAAATAATGCCACCACCGAATAATATTCCATCTTTGTATGAAGATACATGGTCGTCGTTGGGATGTGTACCTTTTCATCTTAATCCAAATCAAGAAAATCAAATAATGATCCCCAAAAGTGATGCCACCCCACACTTTATTGTTGAGAAATTCATCACTCCAAGTACATGGCAGCACTCTGTGGAACCCATTATTGTGCCAAAAGTCTGTGAGAGCATTGAGGATTATGTCTGTAGCATCCCTTATTCTTCTTTTGTTTCACAAGAACATGAAGAAGCCACTACTGTTGCGTGTTACACACCTAGTATTTATCCACAAAATCAAACCGCGACAACCAATCAAGTGGAGGCGGATTACATTGATGCCATCATCATGTCATCGTTGTCATCATCAACAACATCATCTACATCAGTATCATTCATTCAACCAGACAAATAG 1038 0.394 MGHHSCCNKQKVKRGLWSPEEDEKLMNYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSPQEATLIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLLSHDVIPSLATFSDIHSHSNGSMESFFPLTNNPILKSHHHLDQLYLPLIPSPILQGFDHHHNDIKIDINNFNNANFLHFHNPMQEIMPPPNNIPSLYEDTWSSLGCVPFHLNPNQENQIMIPKSDATPHFIVEKFITPSTWQHSVEPIIVPKVCESIEDYVCSIPYSSFVSQEHEEATTVACYTPSIYPQNQTATTNQVEADYIDAIIMSSLSSSTTSSTSVSFIQPDK 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15610g00003 345 Gene3D - 11 67 - -
Mupr15610g00003 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mupr15610g00003 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mupr15610g00003 345 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mupr15610g00003 345 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
Mupr15610g00003 345 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mupr15610g00003 345 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mupr15610g00003 345 Gene3D - 69 116 - -
Mupr15610g00003 345 CDD SANT 17 61 IPR001005 -
Mupr15610g00003 345 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mupr15610g00003 345 FunFam MYB transcription factor 6 66 - -
Mupr15610g00003 345 SMART sant 66 114 IPR001005 -
Mupr15610g00003 345 SMART sant 13 63 IPR001005 -
Mupr15610g00003 345 CDD SANT 69 109 IPR001005 -
Mupr15610g00003 345 FunFam Myb transcription factor 69 116 - -
Mupr15610g00003 345 PANTHER MYB DOMAIN PROTEIN 55 1 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15610g00003 Mupr-Chr15610 29395 30692 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15610g00003 1 118 MYB Transcription Factor Family AT3G13890 94.915 2.86e-80 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr15610g00003 Myb_DNA-binding 3.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15610g00003 K09422 - gmx:102662609 544.658