Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15601g00001 CCTGGTTGCTCATCGGTGGCATACGGAGCATCAGAGGAAATTGGACCATTCCGTATAAACAAAACTGGCTCTTCTCTATATCTTAACAAATATGCATGGAATAGAGAAGCAAATATCCTGTTTCTTGAATCGCCTGCTGGTGTTGGTTTCTCATACACAAATACCAGTTCTGACCTCAAAACTTCTGGGGACAACAGGACAGAAATTTCCAATTTTGTAAAAACAGCTCAGGATGCTCTGATTTTTCTAATTAGATGGATGGCAAGATTCCCACAATATAAATATAGAGACTTTTACATTGCTGGGGAGAGCTATGCAGGGCATTATGTCCCCCAGTTGGCTAAGAAAGTCCACGATTATAATAAAAAAAATCCTCATATCCTGAATCTTAAAGGGTTCATCGTGGGAAATGCTGTGACTGATGACCACTATGACGGGGTTGGAACTGTGACGTATTGGTGGAGCCACTCTTTGATATCTGATCAATCATACAAATCAATCCTCGAAAACTGTAATTTCTCCGAAAAGAACACGAGTGAAAAATGTGACGATGCAGTGAATTATGCAGTTAACAAAGAATTTGGAAACATTGATCAGTACAGTATCTATACTCCCACGTGCCCAACATCACAGAATGATAGTACTTTGAGGCAATATGTTAGGTTCAAGGGTACAATTTTACATGGGATTTCTGGGTATGATCCCTGCACTGAAAATTATGCAGAGAAATACTATAATCGTCGTGATGTGCAGGAAGCATTGCATGCAAATGTTACAAACATTCCTTACAAATGGACTGCATGCAGTGATGTGCTCAATAAAAATTGGAAGGATTCTGAATTTTCTATACTTCCCATTTACCAAGAGTTAATTGCAGCGGGTCTGAGAATCTGGGTTTTCAGTGGAGACACAGATTCAGTGGTTCCAGTAACTGCCACTAGGTTTTCTCTCAGCCATCTGAACCTCACCATCAAAACTCGTTGGTATCCATGGTACTCAAGTGGCCAGGTAGGTGGATGGACAGAGGTGTATGATGGACTAACTTTTGCAACAGTGAGAGGAGCTGGGCATGAAGTACCATTGTTTCAGCCAGCACGAGCTTACATACTTTTCAGGTCCTTTTTGGCAGGGAAAGAGCTACCAAAATCA 1149 0.4108 PGCSSVAYGASEEIGPFRINKTGSSLYLNKYAWNREANILFLESPAGVGFSYTNTSSDLKTSGDNRTEISNFVKTAQDALIFLIRWMARFPQYKYRDFYIAGESYAGHYVPQLAKKVHDYNKKNPHILNLKGFIVGNAVTDDHYDGVGTVTYWWSHSLISDQSYKSILENCNFSEKNTSEKCDDAVNYAVNKEFGNIDQYSIYTPTCPTSQNDSTLRQYVRFKGTILHGISGYDPCTENYAEKYYNRRDVQEALHANVTNIPYKWTACSDVLNKNWKDSEFSILPIYQELIAAGLRIWVFSGDTDSVVPVTATRFSLSHLNLTIKTRWYPWYSSGQVGGWTEVYDGLTFATVRGAGHEVPLFQPARAYILFRSFLAGKELPKS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15601g00001 383 ProSitePatterns Serine carboxypeptidases, histidine active site. 347 364 IPR033124 GO:0004185
Mupr15601g00001 383 SUPERFAMILY alpha/beta-Hydrolases 1 380 IPR029058 -
Mupr15601g00001 383 Gene3D - 283 377 - -
Mupr15601g00001 383 FunFam Carboxypeptidase 283 377 - -
Mupr15601g00001 383 PRINTS Carboxypeptidase C serine protease (S10) family signature 347 360 IPR001563 GO:0004185|GO:0006508
Mupr15601g00001 383 PRINTS Carboxypeptidase C serine protease (S10) family signature 29 41 IPR001563 GO:0004185|GO:0006508
Mupr15601g00001 383 PRINTS Carboxypeptidase C serine protease (S10) family signature 86 111 IPR001563 GO:0004185|GO:0006508
Mupr15601g00001 383 PRINTS Carboxypeptidase C serine protease (S10) family signature 42 52 IPR001563 GO:0004185|GO:0006508
Mupr15601g00001 383 FunFam Carboxypeptidase 232 380 - -
Mupr15601g00001 383 Pfam Serine carboxypeptidase 1 376 IPR001563 GO:0004185|GO:0006508
Mupr15601g00001 383 Gene3D - 236 274 - -
Mupr15601g00001 383 Gene3D alpha/beta hydrolase 1 209 IPR029058 -
Mupr15601g00001 383 FunFam Carboxypeptidase 39 209 - -
Mupr15601g00001 383 ProSitePatterns Serine carboxypeptidases, serine active site. 100 107 IPR018202 GO:0004185
Mupr15601g00001 383 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 1 364 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15601g00001 Mupr-Chr15601 852 5143 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15601g00001 241 380 Calmodulin-binding Proteins AT2G22960 32.624 8.91e-17 76.3