Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mupr15599g00001 | ATGGATCATAAAGAAAAAGATAAAAGAGAGGCTTCAGATCATGAATTGGAATCTTGCAAAGAGATGAAGAGATCTCTTTTGGGGTCTTGCAAAGGTGAAGTTGTTGAGTCAATGGCTGATGAGGTGATTGCAGTGAAAAGCGCCTCTCCAACAATGAGAGAGTGTGATATTTGCGGCAAGATTTTCGGAAGCGGCAAGGCTTTGGGCGGTCACAGAAGATCCCACTTTCAGAAGCAACAAAAGAAGGTAAAAGTCCGTTTCACTAATAATCAGTCCCCAAAAGCAGGTGATAATAGCAACACCAATAATAGGGCTAATTGTGATTATGATGACGATGGCAAACGCGTTTGTTGTATCTGCAAGAAGGAATTCCCCACCAAGAATGCCTTGTTTGGGCACATGAGATCTCACCCTGAGAGGTCATGGAGGGGTGTGTCGCCTCCCACTCATTCTCACAAGCACTCTTATTCTTATTCTTCTTCCTATTCCTATTCTTCTTCCCTCAATTCTGATTCCATGGAAAAAAGTAAAGAAGATCATGATGATGATGATGATTGTGTTGGTGTGTTTGCACCAGATGAACATCATCACATTGATGTCATTGATCTTTCAAAGTTTACTTCACCAAGCTGGCTAAAGAAAGATACAAGAGGGAGAAAGTGTATTGGAGGTTACGAGGCTGCTGAAACCCTTGCTTACCTTAGTGCTTACAAGTACTTTTGTGGTGATCAGTCTAATAATAGGGTTTTCCCCAAGAAGGATGAAGTTCAGCCAAAGAGTGCTTCAGCTTTAATCAGGCATGAAAAAAGGAAGATTGGAGAATCATCTAGTAAGAAGCAGGTGAAGAAGATTAAGTTTTATATGAAGGGTGAGTTGGAGTTGGTGGGAAACAAAGATGGGGCTGCTGAATGTTATGGTGATGGTGGTGGTGGTGAGAAGGTGAATAGGTGCAAGGGTTTATCTGAATCTGGGGTTGAAAGAGTTTCATATATGGATGATGAGGATGTGGGTGTGGATGTGGATGTGGATGTGGGTGAGGGTTTTGATGATGTGAATACTGAAGTAACTACTACTGCTAGGGTGCAAGATCATTTTGCTGAAAGGAAGAAGGTGAAGAAGATGGATCAGAAAGGGAAGAGTAGTAGTAAGAAAATGGTGCTGAAATCAAAGGGAAAAGACCCAGAATGTGAGAATGGAAGTAAAGAGAAAGTGGGTGGGTATAAATGTGGTGCTTGTGGGAAAATTTTCTCAACTTTCCAAGGCCTGGGAGGGCACAGATCAATCCACAAGGAGAAGAACATTGTAATCAAAGATGAATCAAGCCACTCAGATGCAGTTGCTGCTGAAGAAAACAATTCTTTCAACTCAAGTAATATGCACAAGATGGAAGAGGAATTGTTGAATGAAGAACCATTAGCAGATGAAGCATGTCAATCTTCAGGTACCAAAATATTGGACTTTGATCTCAATGAGCCTTATGTTATGGAGGATTGA | 1494 | 0.4137 | MDHKEKDKREASDHELESCKEMKRSLLGSCKGEVVESMADEVIAVKSASPTMRECDICGKIFGSGKALGGHRRSHFQKQQKKVKVRFTNNQSPKAGDNSNTNNRANCDYDDDGKRVCCICKKEFPTKNALFGHMRSHPERSWRGVSPPTHSHKHSYSYSSSYSYSSSLNSDSMEKSKEDHDDDDDCVGVFAPDEHHHIDVIDLSKFTSPSWLKKDTRGRKCIGGYEAAETLAYLSAYKYFCGDQSNNRVFPKKDEVQPKSASALIRHEKRKIGESSSKKQVKKIKFYMKGELELVGNKDGAAECYGDGGGGEKVNRCKGLSESGVERVSYMDDEDVGVDVDVDVGEGFDDVNTEVTTTARVQDHFAERKKVKKMDQKGKSSSKKMVLKSKGKDPECENGSKEKVGGYKCGACGKIFSTFQGLGGHRSIHKEKNIVIKDESSHSDAVAAEENNSFNSSNMHKMEEELLNEEPLADEACQSSGTKILDFDLNEPYVMED | 497 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mupr15599g00001 | 497 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 115 | 137 | IPR013087 | - | |
| Mupr15599g00001 | 497 | SUPERFAMILY | beta-beta-alpha zinc fingers | 116 | 429 | IPR036236 | - | |
| Mupr15599g00001 | 497 | Pfam | C2H2-type zinc finger | 54 | 75 | - | - | |
| Mupr15599g00001 | 497 | Pfam | C2H2-type zinc finger | 116 | 139 | - | - | |
| Mupr15599g00001 | 497 | Pfam | C2H2-type zinc finger | 407 | 431 | - | - | |
| Mupr15599g00001 | 497 | MobiDBLite | consensus disorder prediction | 69 | 105 | - | - | |
| Mupr15599g00001 | 497 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 407 | 434 | IPR013087 | - | |
| Mupr15599g00001 | 497 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 55 | 75 | IPR013087 | - | |
| Mupr15599g00001 | 497 | MobiDBLite | consensus disorder prediction | 83 | 105 | - | - | |
| Mupr15599g00001 | 497 | MobiDBLite | consensus disorder prediction | 368 | 401 | - | - | |
| Mupr15599g00001 | 497 | MobiDBLite | consensus disorder prediction | 138 | 158 | - | - | |
| Mupr15599g00001 | 497 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 53 | 80 | IPR013087 | - | |
| Mupr15599g00001 | 497 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 409 | 429 | IPR013087 | - | |
| Mupr15599g00001 | 497 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 117 | 137 | IPR013087 | - | |
| Mupr15599g00001 | 497 | Gene3D | Classic Zinc Finger | 53 | 137 | - | - | |
| Mupr15599g00001 | 497 | PANTHER | C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED | 18 | 496 | IPR044653 | GO:0003700 | |
| Mupr15599g00001 | 497 | SMART | c2h2final6 | 407 | 429 | IPR013087 | - | |
| Mupr15599g00001 | 497 | SMART | c2h2final6 | 115 | 137 | IPR013087 | - | |
| Mupr15599g00001 | 497 | SMART | c2h2final6 | 53 | 75 | IPR013087 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mupr15599g00001 | Mupr-Chr15599 | 1441 | 2934 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mupr15599g00001 | 55 | 158 | C2H2 Transcription Factor Family | AT2G26940 | 40.000 | 1.19e-16 | 78.6 |
Transcription factors information