Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15592g00001 ATGGCAAACTACCACCGCAACAACGTCGAAAACGTGGTTCTCGGCCACCGTTCCAAGTCCGCCTCCGTCGCTGGCCACTTCCGCCTATGGCACTCCCTCTCCGCCGCGTCCTTCCGCCGCCTCGTCTTCGACGCCGTCAGCTGCGGCGCCAGCTCCCGCTTCACGGAGAGATCCGACTCCTCCGACGAGAACCACCACCGCCACCAGCAGCAACAAAAACAACAGCATAAGACAACGCCGAATGCTCGGTCGGAGAAGCTCTCGGATCTGCTGAGTATCGCGGAGGTTGAGGCCGACGCGGAGACGAAGAAGAAAGAAGAAAAACTCGAGGACCTGAAGCGCCTCATGAAGGAGCTTCACCGCGAAGAAGATTCGGATTCGACGAAGAGACGAGAAGCCGCAACAACGGTGAGGTTGCTAGCGAAGGAAGATTTAGAGGTTCGAGGAACGCTCGCGATGTTAGGAGCCATTCCTCCTCTCGTCACAATGCTCGACGACTCCCGAGGCGACGTCGCTTCGCTCGTCGCCGCTCTCTACGCGCTGCTCAATCTCGGCATAGGAAACGACGCGTCGTACTGCACAGGATGTTGGCGTTCATTGAATAAAGCAGCTATTGTGAAAGTTGGGTCCGTTGAGAAGATGCTGAACCTGATTGAATCTCCAGATGGTCTTGATTCTTCGGTTTCCGAAGCAATTGTTGCGAATTTCCTTGGATTGAGTGCTTTGGACTCGAACAAACCGATAATTGGGTCTTCTGCTGCAATTCCTTTCTTAGTTAGAACCCTTCAGAGTTTAGATAATAAGAGTAGTCCCCAAGCCAAGCAAGATGCTCTGCGAGCATTGTACAACCTTTCAATCTTCCCAGCCAATGTTTCATTCATATTGGAAACTGATTTGGTTGTGTTTCTGGTGAACTCGATAGGGGACATGGAAGTAACTGAAAGAACTCTTGCAATTCTCAGCAATTTGGTGTCGACCCGGGAGGGTAGAAAGGCAATCAGTGCCGTGTTGGATGCGATCCCGATCCTGGTGGATGTGTTGAATTGGACGGATTCGCCGGAATGCCAGGAGAAGGCATCGTACATTTTGATGGTCATGGCACACAAGTCCTATGGTGACAAACAGGCCATGATTGAGGCAGGGATTGTGTCATCACTGCTTGAGTTGTCCCTTTTAGGTACCACATTGGCTCAGAAAAGAGCATCAAGGGTATTGGAAATTTTGAGGGTGGACAAAGGGAAGCAGGTTTCTGGGAGCTATGGCTTGGGTGCAGCTGTCTCTGCCCCTATTTGTGGCTCTTCGTCAGCAGCGTGTGCGACTCCGGACGGAGGAGGAAAAGAGTGTTTTGAGGAAGAGGAAGAGATGATGAGTGAGGAGAAGAAAGCAGTGAAGCAATTAGTCCAGCAGAGTTTGCAGAACAACATGAGGAAAATTGTAAAGAGAGCCAATTTGCCTAAAGATATCGTGCCATCAGATCATTTCAATCGCAGATCCAAATGGCGTGTGGAAGGATTACAACTTAGATCTGGTTGGGATGAAGAGCTGAGCTGTTCGTTGCAAATAAGTATCAAGGAGCATTTTGTTCCCATTATGTAA 1596 0.5044 MANYHRNNVENVVLGHRSKSASVAGHFRLWHSLSAASFRRLVFDAVSCGASSRFTERSDSSDENHHRHQQQQKQQHKTTPNARSEKLSDLLSIAEVEADAETKKKEEKLEDLKRLMKELHREEDSDSTKRREAATTVRLLAKEDLEVRGTLAMLGAIPPLVTMLDDSRGDVASLVAALYALLNLGIGNDASYCTGCWRSLNKAAIVKVGSVEKMLNLIESPDGLDSSVSEAIVANFLGLSALDSNKPIIGSSAAIPFLVRTLQSLDNKSSPQAKQDALRALYNLSIFPANVSFILETDLVVFLVNSIGDMEVTERTLAILSNLVSTREGRKAISAVLDAIPILVDVLNWTDSPECQEKASYILMVMAHKSYGDKQAMIEAGIVSSLLELSLLGTTLAQKRASRVLEILRVDKGKQVSGSYGLGAAVSAPICGSSSAACATPDGGGKECFEEEEEMMSEEKKAVKQLVQQSLQNNMRKIVKRANLPKDIVPSDHFNRRSKWRVEGLQLRSGWDEELSCSLQISIKEHFVPIM 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15592g00001 531 Coils Coil 449 469 - -
Mupr15592g00001 531 Gene3D - 307 468 IPR011989 -
Mupr15592g00001 531 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 22 495 - -
Mupr15592g00001 531 Coils Coil 95 125 - -
Mupr15592g00001 531 SMART arm_5 242 286 IPR000225 GO:0005515
Mupr15592g00001 531 SMART arm_5 329 368 IPR000225 GO:0005515
Mupr15592g00001 531 SMART arm_5 287 325 IPR000225 GO:0005515
Mupr15592g00001 531 SMART arm_5 369 410 IPR000225 GO:0005515
Mupr15592g00001 531 SMART arm_5 144 186 IPR000225 GO:0005515
Mupr15592g00001 531 SMART arm_5 198 241 IPR000225 GO:0005515
Mupr15592g00001 531 SUPERFAMILY ARM repeat 97 408 IPR016024 -
Mupr15592g00001 531 Gene3D - 50 306 IPR011989 -
Mupr15592g00001 531 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 155 184 IPR000225 GO:0005515
Mupr15592g00001 531 MobiDBLite consensus disorder prediction 54 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15592g00001 Mupr-Chr15592 5451 8584 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15592g00001 109 412 U-box Gene Family AT1G67530 29.773 4.63e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15592g00001 - - gmx:100788575 676.781